STRINGSTRING
Sthe_3109 Sthe_3109 Sthe_3120 Sthe_3120 glpK glpK Sthe_3122 Sthe_3122 Sthe_3123 Sthe_3123 Sthe_3124 Sthe_3124
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sthe_3109PFAM: FAD dependent oxidoreductase; KEGG: hha:Hhal_0079 FAD dependent oxidoreductase. (550 aa)
Sthe_3120TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; PFAM: PTS system fructose subfamily IIA component; KEGG: bra:BRADO4613 putative dihydroxyacetone kinase phosphotransfer protein (DhaH/M-like). (133 aa)
glpKGlycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. (498 aa)
Sthe_3122TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: dvm:DvMF_2583 dihydroxyacetone kinase, L subunit. (213 aa)
Sthe_3123Dihydroxyacetone kinase, DhaK subunit; KEGG: scl:sce2491 Glycerone kinase DAK1 domain- containing protein; TIGRFAM: dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase. (333 aa)
Sthe_3124TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: hypothetical protein; K09876 aquaporin-3; Belongs to the MIP/aquaporin (TC 1.A.8) family. (319 aa)
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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