STRINGSTRING
Sthe_0094 Sthe_0094 Sthe_0095 Sthe_0095 Sthe_0118 Sthe_0118 Sthe_0442 Sthe_0442 Sthe_0443 Sthe_0443 Sthe_0444 Sthe_0444 Sthe_0446 Sthe_0446 Sthe_0608 Sthe_0608 Sthe_0609 Sthe_0609 Sthe_0610 Sthe_0610 Sthe_0611 Sthe_0611 Sthe_0675 Sthe_0675 Sthe_0833 Sthe_0833 Sthe_0903 Sthe_0903 Sthe_1241 Sthe_1241 Sthe_1242 Sthe_1242 Sthe_1243 Sthe_1243 Sthe_1244 Sthe_1244 Sthe_1246 Sthe_1246 Sthe_1247 Sthe_1247 Sthe_1448 Sthe_1448 Sthe_1682 Sthe_1682 Sthe_1694 Sthe_1694 Sthe_1695 Sthe_1695 Sthe_1696 Sthe_1696 Sthe_1697 Sthe_1697 Sthe_2043 Sthe_2043 Sthe_2094 Sthe_2094 Sthe_2174 Sthe_2174 Sthe_2187 Sthe_2187 Sthe_2188 Sthe_2188 Sthe_2189 Sthe_2189 Sthe_2190 Sthe_2190 Sthe_2191 Sthe_2191 Sthe_2192 Sthe_2192 Sthe_2340 Sthe_2340 Sthe_2345 Sthe_2345 Sthe_2346 Sthe_2346 Sthe_2347 Sthe_2347 Sthe_2352 Sthe_2352 Sthe_2353 Sthe_2353 Sthe_2654 Sthe_2654 Sthe_2822 Sthe_2822 Sthe_3197 Sthe_3197 Sthe_3198 Sthe_3198 Sthe_3344 Sthe_3344 Sthe_3345 Sthe_3345
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sthe_0094Transcriptional regulator, LuxR family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; regulatory protein LuxR; sigma-70 region 4 domain protein; KEGG: rfr:Rfer_4146 sigma-24 (FecI-like); Belongs to the sigma-70 factor family. ECF subfamily. (191 aa)
Sthe_0095Hypothetical protein; KEGG: hau:Haur_4531 serine/threonine protein kinase. (763 aa)
Sthe_0118PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: rxy:Rxyl_0943 serine/threonine protein kinase. (343 aa)
Sthe_0442Hypothetical protein. (41 aa)
Sthe_0443KEGG: dau:Daud_1360 hypothetical protein. (74 aa)
Sthe_0444KEGG: rrs:RoseRS_1536 hypothetical protein. (298 aa)
Sthe_0446TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: cau:Caur_2026 HAD family hydrolase; Belongs to the HAD-like hydrolase superfamily. (273 aa)
Sthe_0608Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: ttj:TTHA1352 response regulator. (237 aa)
Sthe_0609RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: rca:Rcas_0731 ECF subfamily RNA polymerase sigma-24 factor. (224 aa)
Sthe_0610Hypothetical protein; KEGG: cau:Caur_0926 putative transmembrane anti- sigma factor. (262 aa)
Sthe_0611PFAM: protein of unknown function DUF541; KEGG: afw:Anae109_1013 hypothetical protein. (252 aa)
Sthe_0675RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: rrs:RoseRS_2793 ECF subfamily RNA polymerase sigma-24 factor. (208 aa)
Sthe_0833PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: hau:Haur_2960 serine/threonine protein kinase with PASTA sensor(s). (625 aa)
Sthe_0903PFAM: DEAD/DEAH box helicase domain protein; DSH domain protein; helicase domain protein; SMART: DEAD-like helicases; helicase domain protein; AAA ATPase; KEGG: sgr:SGR_5873 putative ATP-dependent RNA helicase. (962 aa)
Sthe_1241KEGG: ace:Acel_0539 anti-sigma factor. (74 aa)
Sthe_1242RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: sgr:SGR_2306 RNA polymerase ECF-subfamily sigma factor. (204 aa)
Sthe_1243Hypothetical protein. (124 aa)
Sthe_1244PFAM: protein of unknown function DUF151; KEGG: cau:Caur_1420 hypothetical protein. (180 aa)
Sthe_1246PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; Pyrrolo-quinoline quinone; SMART: serine/threonine protein kinase; tyrosine protein kinase; Pyrrolo-quinoline quinone; KEGG: cau:Caur_3817 protein kinase. (638 aa)
Sthe_1247KEGG: hau:Haur_4045 hypothetical protein. (88 aa)
Sthe_1448PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: cau:Caur_1025 PpiC-type peptidyl-prolyl cis- trans isomerase. (473 aa)
Sthe_1682PFAM: Protein phosphatase 2C-like; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: rrs:RoseRS_4547 protein phosphatase 2C domain- containing protein. (295 aa)
Sthe_1694FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: hau:Haur_4979 FHA domain-containing protein. (149 aa)
Sthe_1695FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: rrs:RoseRS_1781 FHA domain-containing protein. (252 aa)
Sthe_1696Hypothetical protein. (43 aa)
Sthe_1697PFAM: Ion transport 2 domain protein; KEGG: spv:SPH_1336 potassium/ion channel protein. (273 aa)
Sthe_2043RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family. (219 aa)
Sthe_2094PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: cyt:cce_5227 hypothetical protein. (170 aa)
Sthe_2174RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: cts:Ctha_1394 RNA polymerase, sigma-24 subunit, ECF subfamily. (182 aa)
Sthe_2187KEGG: rca:Rcas_4069 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; Belongs to the peptidase S41A family. (464 aa)
Sthe_2188PFAM: PDZ/DHR/GLGF domain protein; peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; KEGG: rca:Rcas_2149 2-alkenal reductase. (381 aa)
Sthe_2189RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: rca:Rcas_2697 ECF subfamily RNA polymerase sigma-24 factor. (194 aa)
Sthe_2190KEGG: rca:Rcas_2698 putative transmembrane anti- sigma factor. (396 aa)
Sthe_2191PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_1236 ABC transporter related. (324 aa)
Sthe_2192KEGG: rca:Rcas_3764 hypothetical protein. (285 aa)
Sthe_2340FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: rca:Rcas_2253 adenylate cyclase. (193 aa)
Sthe_2345Hypothetical protein. (441 aa)
Sthe_2346RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: rca:Rcas_0988 ECF subfamily RNA polymerase sigma-24 factor. (181 aa)
Sthe_2347PFAM: peptidase M28; protease-associated PA domain protein; KEGG: sgl:SG2051 hypothetical protein. (592 aa)
Sthe_2352Hypothetical protein. (612 aa)
Sthe_2353Transcriptional regulator, LuxR family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; regulatory protein LuxR; sigma-70 region 4 domain protein; KEGG: sth:STH2528 RNA polymerase ECF-type sigma factor. (198 aa)
Sthe_2654PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: azo:azo3774 putative serine/threonine protein kinase. (592 aa)
Sthe_2822TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: eba:ebA312 HAD family sugar phosphatase. (282 aa)
Sthe_3197RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: mxa:MXAN_3686 ECF subfamily RNA polymerase sigma factor. (193 aa)
Sthe_3198PFAM: Anti-sigma-K factor RskA; KEGG: ank:AnaeK_0242 Fe-S oxidoreductase. (256 aa)
Sthe_3344PFAM: Anti-sigma-K factor RskA; KEGG: aav:Aave_2584 hypothetical protein. (265 aa)
Sthe_3345RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: rso:RSc2361 RNA polymerase sigma-E factor sigma-24 homolog transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily. (193 aa)
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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