STRINGSTRING
gmhA gmhA Sthe_0041 Sthe_0041 hldE hldE Sthe_0043 Sthe_0043 Sthe_0044 Sthe_0044 Sthe_0045 Sthe_0045 Sthe_0046 Sthe_0046 Sthe_0047 Sthe_0047 Sthe_0048 Sthe_0048 Sthe_0049 Sthe_0049 Sthe_1712 Sthe_1712 Sthe_1713 Sthe_1713 Sthe_1715 Sthe_1715 Sthe_1749 Sthe_1749 Sthe_1751 Sthe_1751 Sthe_3288 Sthe_3288
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gmhASugar isomerase (SIS); Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily. (218 aa)
Sthe_0041TIGRFAM: histidinol-phosphate phosphatase family protein; HAD-superfamily hydrolase, subfamily IA, variant 3; D,D-heptose 1,7-bisphosphate phosphatase; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase central region; Haloacid dehalogenase domain protein hydrolase; KEGG: azo:azo1807 heptose phosphatase. (214 aa)
hldECytidyltransferase-related domain protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. (507 aa)
Sthe_0043PFAM: glycosyl transferase family 9; KEGG: azo:azo1806 ADP-heptose--LPS heptosyltransferase II. (381 aa)
Sthe_0044PFAM: glycosyl transferase family 9; KEGG: fal:FRAAL3929 putative heptosyl transferase. (361 aa)
Sthe_0045PFAM: glycosyl transferase family 9; KEGG: bpm:BURPS1710b_A1385 ADP-heptose--LPS heptosyltransferase II. (355 aa)
Sthe_0046PFAM: glycosyl transferase group 1; KEGG: reu:Reut_B4382 glycosyl transferase, group 1. (353 aa)
Sthe_0047PFAM: glycosyl transferase group 1; KEGG: azo:azo1809 glycosyltransferase. (477 aa)
Sthe_0048PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rpi:Rpic_4881 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (252 aa)
Sthe_0049PFAM: sugar isomerase (SIS); KEGG: rrs:RoseRS_3171 sugar isomerase (SIS). (208 aa)
Sthe_1712TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; KEGG: glo:Glov_0772 lipopolysaccharide heptosyltransferase II. (381 aa)
Sthe_1713PFAM: glycosyl transferase family 9; KEGG: cau:Caur_1960 glycosyl transferase family protein. (379 aa)
Sthe_1715PFAM: glycosyl transferase family 9; KEGG: glo:Glov_0772 lipopolysaccharide heptosyltransferase II. (387 aa)
Sthe_1749PFAM: PfkB domain protein; KEGG: cau:Caur_2356 ribokinase-like domain- containing protein. (339 aa)
Sthe_1751TIGRFAM: cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; KEGG: cau:Caur_2177 cytidyltransferase-like protein. (171 aa)
Sthe_3288PFAM: glycosyl transferase family 9; KEGG: bcm:Bcenmc03_6036 glycosyl transferase family protein. (375 aa)
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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