STRINGSTRING
Sthe_1640 Sthe_1640 Sthe_1642 Sthe_1642 Sthe_1643 Sthe_1643 Sthe_1644 Sthe_1644 Sthe_1645 Sthe_1645 Sthe_1773 Sthe_1773 nhaA-2 nhaA-2 Sthe_2984 Sthe_2984 Sthe_2985 Sthe_2985 Sthe_2986 Sthe_2986 Sthe_3126 Sthe_3126 Sthe_3380 Sthe_3380 Sthe_3522 Sthe_3522
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sthe_1640KEGG: ade:Adeh_3797 hypothetical protein. (290 aa)
Sthe_1642PFAM: metallophosphoesterase; KEGG: rrs:RoseRS_2607 metallophosphoesterase. (243 aa)
Sthe_1643PFAM: UspA domain protein; KEGG: det:DET0028 universal stress protein. (146 aa)
Sthe_1644PFAM: TrkA-N domain protein; KEGG: csc:Csac_0151 TrkA domain-containing protein. (139 aa)
Sthe_1645PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: deb:DehaBAV1_0025 TrkA domain-containing protein. (218 aa)
Sthe_1773PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: deb:DehaBAV1_1372 sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (574 aa)
nhaA-2Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. (444 aa)
Sthe_2984Transcriptional regulator, MerR family; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: tgr:Tgr7_2809 putative transcriptional regulator, MerR family. (164 aa)
Sthe_2985KEGG: pol:Bpro_0215 cation transporter; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter. (492 aa)
Sthe_2986PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: azo:azo3091 putative potassium uptake protein. (215 aa)
Sthe_3126PFAM: TrkA-N domain protein; TrkA-C domain protein; sodium/hydrogen exchanger; KEGG: dol:Dole_2292 sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (614 aa)
Sthe_3380PFAM: sodium/hydrogen exchanger; KEGG: pca:Pcar_0178 Na+/H+ antiporter. (411 aa)
Sthe_3522PFAM: MscS Mechanosensitive ion channel; KEGG: tbd:Tbd_0499 mechanosensitive ion channel. (332 aa)
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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