STRINGSTRING
Sthe_0396 Sthe_0396 Sthe_1096 Sthe_1096 Sthe_1519 Sthe_1519 Sthe_1526 Sthe_1526 Sthe_2643 Sthe_2643
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sthe_0396PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rrs:RoseRS_0168 aminotransferase, class V. (392 aa)
Sthe_1096PFAM: heat shock protein DnaJ domain protein; KEGG: amr:AM1_1788 DnaJ-like protein, putative. (280 aa)
Sthe_1519PFAM: nitrogen-fixing NifU domain protein; KEGG: rxy:Rxyl_2194 SUF system FeS assembly protein. (167 aa)
Sthe_1526TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: hau:Haur_0408 NifU family SUF system FeS assembly protein. (127 aa)
Sthe_2643Cysteine desulfurase; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: geo:Geob_2507 aminotransferase class V. (384 aa)
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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