STRINGSTRING
Sthe_0309 Sthe_0309 Sthe_0388 Sthe_0388 Sthe_0389 Sthe_0389 Sthe_1895 Sthe_1895 Sthe_1896 Sthe_1896
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sthe_03094-phytase; PFAM: extracellular solute-binding protein family 5; KEGG: deb:DehaBAV1_0943 extracellular solute- binding protein. (603 aa)
Sthe_0388KEGG: cau:Caur_2261 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (331 aa)
Sthe_0389KEGG: cau:Caur_2260 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (342 aa)
Sthe_1895PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: deb:DehaBAV1_0941 binding-protein-dependent transport systems inner membrane component. (314 aa)
Sthe_1896PFAM: extracellular solute-binding protein family 5; KEGG: sde:Sde_2028 oligopeptide ABC transporter periplasmic oligopeptide-binding protein. (598 aa)
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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