STRINGSTRING
Sthe_1754 Sthe_1754 Sthe_1755 Sthe_1755 crcB crcB Sthe_1757 Sthe_1757 Sthe_1761 Sthe_1761
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sthe_1754PFAM: Cupin 2 conserved barrel domain protein; KEGG: mxa:MXAN_5221 hypothetical protein. (124 aa)
Sthe_1755Putative transmembrane anti-sigma factor; KEGG: cau:Caur_1861 hypothetical protein. (249 aa)
crcBCrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (124 aa)
Sthe_1757PFAM: Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: lfe:LAF_1820 hypothetical protein. (479 aa)
Sthe_1761TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: pla:Plav_3434 AbrB family transcriptional regulator. (97 aa)
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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