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Sthe_3340 | Hypothetical protein. (240 aa) | ||||
Sthe_3341 | SMART: AAA ATPase; KEGG: mpt:Mpe_A0763 ATP-dependent transcriptional regulator-like protein protein. (467 aa) | ||||
Sthe_3344 | PFAM: Anti-sigma-K factor RskA; KEGG: aav:Aave_2584 hypothetical protein. (265 aa) | ||||
Sthe_3345 | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: rso:RSc2361 RNA polymerase sigma-E factor sigma-24 homolog transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily. (193 aa) | ||||
Sthe_3394 | PFAM: regulatory protein LysR; KEGG: sfu:Sfum_1701 putative transcriptional regulator, ModE family. (136 aa) | ||||
Sthe_3401 | Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: smd:Smed_6276 CRP/FNR family transcriptional regulator. (252 aa) | ||||
Sthe_3406 | KEGG: gur:Gura_1941 metal dependent phosphohydrolase; TIGRFAM: diguanylate cyclase; metal dependent phophohydrolase; PFAM: GGDEF domain containing protein; GAF domain protein; metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: GGDEF domain containing protein; metal- dependent phosphohydrolase HD region; GAF domain protein. (1113 aa) | ||||
Sthe_3417 | Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (86 aa) | ||||
Sthe_3426 | Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR. (227 aa) | ||||
Sthe_0005 | Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: cau:Caur_2267 GntR domain-containing protein. (246 aa) | ||||
Sthe_0039 | Transcriptional regulator, CdaR; KEGG: aha:AHA_0640 carbohydrate diacid regulator. (397 aa) | ||||
Sthe_0050 | TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: rce:RC1_3519 DNA binding domain, excisionase family, putative. (149 aa) | ||||
Sthe_0075 | PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mxa:MXAN_0675 hypothetical protein. (161 aa) | ||||
Sthe_0094 | Transcriptional regulator, LuxR family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; regulatory protein LuxR; sigma-70 region 4 domain protein; KEGG: rfr:Rfer_4146 sigma-24 (FecI-like); Belongs to the sigma-70 factor family. ECF subfamily. (191 aa) | ||||
Sthe_0107 | Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rxy:Rxyl_0881 transcriptional regulator, MarR family. (165 aa) | ||||
Sthe_0135 | KEGG: ookinete protein. (600 aa) | ||||
Sthe_0155 | Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; Bacterio-opsin activator HTH domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sth:STH923 two-component response regulator. (216 aa) | ||||
Sthe_0182 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcl:ABC0529 two-component response regulator. (231 aa) | ||||
Sthe_0200 | Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: gtn:GTNG_3075 two-component response regulator. (223 aa) | ||||
Sthe_0235 | PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: rha:RHA1_ro08622 IclR family transcriptional regulator. (309 aa) | ||||
Sthe_0238 | KEGG: hau:Haur_3291 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein. (485 aa) | ||||
Sthe_0243 | Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: cau:Caur_3230 response regulator receiver. (223 aa) | ||||
greA | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. (157 aa) | ||||
Sthe_0265 | Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: msm:MSMEG_4057 transcriptional regulator, GntR family protein. (224 aa) | ||||
Sthe_0269 | PFAM: Cold-shock protein DNA-binding; Ribonuclease B OB region domain; SMART: Cold shock protein; KEGG: cpo:COPRO5265_1161 hypothetical protein. (77 aa) | ||||
Sthe_0285 | Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: nfa:nfa3720 putative transcriptional regulator. (122 aa) | ||||
Sthe_0315 | PFAM: aminotransferase class I and II; KEGG: lch:Lcho_3539 GntR family transcriptional regulator. (402 aa) | ||||
Sthe_0353 | Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: fal:FRAAL1706 MarR family transcriptional regulator. (174 aa) | ||||
Sthe_0368 | KEGG: det:DET0136 sensory box sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; histidine kinase HAMP region domain protein. (598 aa) | ||||
Sthe_0369 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: lac:LBA0078 putative response regulator. (233 aa) | ||||
nusB | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. (140 aa) | ||||
Sthe_0397 | TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mta:Moth_1653 BadM/Rrf2 family transcriptional regulator. (143 aa) | ||||
Sthe_0400 | Transcriptional regulator, MerR family; KEGG: rha:RHA1_ro05652 redox-sensitive transcriptional activator; TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR. (153 aa) | ||||
Sthe_0432 | PFAM: transcriptional regulator PadR family protein; KEGG: rxy:Rxyl_2708 transcriptional regulator, PadR family. (215 aa) | ||||
Sthe_0440 | Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: nis:NIS_0956 MerR family transcriptional regulator. (119 aa) | ||||
Sthe_0444 | KEGG: rrs:RoseRS_1536 hypothetical protein. (298 aa) | ||||
Sthe_0459 | TIGRFAM: translation elongation factor G; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: mta:Moth_1142 elongation factor G. (693 aa) | ||||
Sthe_0469 | Putative transmembrane anti-sigma factor; KEGG: rca:Rcas_0510 serine/threonine protein kinase. (575 aa) | ||||
Sthe_0470 | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: pth:PTH_2134 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein; Belongs to the sigma-70 factor family. ECF subfamily. (195 aa) | ||||
csrA | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. (83 aa) | ||||
fliW | Protein of unknown function DUF180; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. (145 aa) | ||||
Sthe_0564 | PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: psb:Psyr_3488 anti-sigma-28 factor, FlgM. (105 aa) | ||||
Sthe_0569 | RNA polymerase, sigma 28 subunit, FliA/WhiG; KEGG: ace:Acel_1546 RNA polymerase sigma factor WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma- 70 region 3 domain protein. (264 aa) | ||||
Sthe_0608 | Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: ttj:TTHA1352 response regulator. (237 aa) | ||||
Sthe_0609 | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: rca:Rcas_0731 ECF subfamily RNA polymerase sigma-24 factor. (224 aa) | ||||
Sthe_0628 | Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rce:RC1_3977 nitrite and nitric oxide reductase regulator. (248 aa) | ||||
Sthe_0648 | PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: afw:Anae109_1850 response regulator receiver protein. (131 aa) | ||||
Sthe_0649 | TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: scl:sce1736 citrate synthase. (83 aa) | ||||
Sthe_0675 | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: rrs:RoseRS_2793 ECF subfamily RNA polymerase sigma-24 factor. (208 aa) | ||||
Sthe_0681 | PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rxy:Rxyl_0929 transcriptional regulator, GntR family. (264 aa) | ||||
selA | L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis. (478 aa) | ||||
hrcA | Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. (347 aa) | ||||
prfB | Conserved hypothetical protein; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. (369 aa) | ||||
sigA | RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (538 aa) | ||||
Sthe_0751 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: mta:Moth_1478 two component transcriptional regulator. (224 aa) | ||||
Sthe_0762 | Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rrs:RoseRS_1206 MarR family transcriptional regulator. (215 aa) | ||||
efp | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. (186 aa) | ||||
Sthe_0816 | PFAM: biotin/lipoate A/B protein ligase; KEGG: afl:Aflv_1125 biotin operon repressor containing HTH and biotin-(acetyl-CoA carboxylase) ligase domains. (178 aa) | ||||
Sthe_0867 | Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; KEGG: rrs:RoseRS_0938 two component LuxR family transcriptional regulator. (242 aa) | ||||
Sthe_0910 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sru:SRU_2488 response regulator DrrA. (240 aa) | ||||
Sthe_0984 | PFAM: protein of unknown function DUF55; KEGG: pho:PH1033 hypothetical protein. (158 aa) | ||||
fusA | Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...] (701 aa) | ||||
tuf | Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (399 aa) | ||||
infA | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. (73 aa) | ||||
infA-2 | Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex. (91 aa) | ||||
greA-2 | GreA/GreB family elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. (156 aa) | ||||
Sthe_1115 | Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: hau:Haur_0838 two component, sigma54 specific, fis family transcriptional regulator. (465 aa) | ||||
Sthe_1168 | Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. (97 aa) | ||||
infC | Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins. (204 aa) | ||||
sigA-2 | RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (390 aa) | ||||
lepA | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. (610 aa) | ||||
Sthe_1229 | Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: rha:RHA1_ro04495 transcriptional regulator. (549 aa) | ||||
Sthe_1241 | KEGG: ace:Acel_0539 anti-sigma factor. (74 aa) | ||||
Sthe_1242 | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: sgr:SGR_2306 RNA polymerase ECF-subfamily sigma factor. (204 aa) | ||||
nusA | NusA antitermination factor; Participates in both transcription termination and antitermination. (443 aa) | ||||
infB | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (633 aa) | ||||
Sthe_1270 | Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; response regulator receiver; Bacterio-opsin activator HTH domain protein; SMART: regulatory protein LuxR; response regulator receiver; KEGG: rxy:Rxyl_0094 two component transcriptional regulator, LuxR family. (219 aa) | ||||
Sthe_1366 | Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rca:Rcas_1579 two component LuxR family transcriptional regulator. (249 aa) | ||||
Sthe_1367 | PFAM: Helix-turn-helix type 11 domain protein; KEGG: fra:Francci3_0312 putative transcriptional regulator. (324 aa) | ||||
Sthe_1372 | Transcriptional regulator, ArsR family; PFAM: Protein-tyrosine phosphatase, low molecular weight; regulatory protein ArsR; SMART: Protein-tyrosine phosphatase, low molecular weight; regulatory protein ArsR; KEGG: hau:Haur_3330 ArsR family transcriptional regulator. (270 aa) | ||||
Sthe_1375 | Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: sco:SCO6808 transcription regulator ArsR. (118 aa) | ||||
Sthe_1380 | Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: scl:sce2129 MerR family transcriptional regulator. (148 aa) | ||||
Sthe_1437 | Two component transcriptional regulator, winged helix family; PFAM: transcriptional regulator domain protein; response regulator receiver; SMART: response regulator receiver; KEGG: saq:Sare_0404 two component transcriptional regulator. (254 aa) | ||||
hpf | Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (194 aa) | ||||
Sthe_1487 | Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: dau:Daud_2104 helix-turn-helix domain- containing protein. (74 aa) | ||||
Sthe_1521 | Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: dsy:DSY2922 hypothetical protein; Belongs to the Fur family. (142 aa) | ||||
Sthe_1552 | Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rxy:Rxyl_0160 two component transcriptional regulator, LuxR family. (211 aa) | ||||
rplA | Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (241 aa) | ||||
nusG | NusG antitermination factor; Participates in transcription elongation, termination and antitermination. (200 aa) | ||||
tuf-2 | Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (399 aa) | ||||
Sthe_1615 | Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rca:Rcas_1579 two component LuxR family transcriptional regulator. (234 aa) | ||||
Sthe_1646 | Transcriptional regulator, HxlR family; PFAM: helix-turn-helix HxlR type; KEGG: nca:Noca_4912 helix-turn-helix, HxlR type. (253 aa) | ||||
Sthe_1658 | Arsenate reductase-like protein; PFAM: arsenate reductase and related; KEGG: sth:STH627 hypothetical protein; Belongs to the ArsC family. (93 aa) | ||||
mfd | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1173 aa) | ||||
lexA | SOS-response transcriptional repressor, LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (213 aa) | ||||
tsf | Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. (186 aa) | ||||
Sthe_1746 | PFAM: Helix-turn-helix type 11 domain protein; KEGG: sfu:Sfum_2823 putative transcriptional regulator. (354 aa) | ||||
Sthe_1755 | Putative transmembrane anti-sigma factor; KEGG: cau:Caur_1861 hypothetical protein. (249 aa) | ||||
Sthe_1761 | TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: pla:Plav_3434 AbrB family transcriptional regulator. (97 aa) | ||||
Sthe_1815 | PFAM: protein of unknown function DUF156; KEGG: cef:CE0406 hypothetical protein. (104 aa) | ||||
Sthe_1819 | PFAM: ferric-uptake regulator; KEGG: deh:cbdb_A24 FUR family transcriptional regulator; Belongs to the Fur family. (150 aa) | ||||
Sthe_1845 | TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; KEGG: hau:Haur_0125 RNA polymerase, sigma 54 subunit, RpoN. (472 aa) | ||||
Sthe_1849 | RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (341 aa) | ||||
Sthe_1862 | PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: afw:Anae109_2598 response regulator receiver protein. (135 aa) | ||||
Sthe_1890 | PFAM: Proline dehydrogenase; KEGG: gka:GK3010 proline dehydrogenase. (316 aa) | ||||
prfA | Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. (361 aa) | ||||
Sthe_1941 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pth:PTH_0048 response regulator. (240 aa) | ||||
Sthe_1974 | TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; Elongation factor SelB winged helix 3; Elongation factor SelB winged helix 2; elongation factor Tu domain 2 protein; KEGG: cau:Caur_0243 selenocysteine-specific translation elongation factor. (630 aa) | ||||
nrdR | ATP-cone domain protein; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family. (158 aa) | ||||
mraZ | TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; KEGG: rca:Rcas_1104 MraZ protein; Belongs to the MraZ family. (142 aa) | ||||
Sthe_2015 | PFAM: ThiJ/PfpI domain protein; KEGG: mex:Mext_1154 ThiJ/PfpI domain-containing protein. (187 aa) | ||||
Sthe_2027 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sth:STH415 two-component response regulator. (244 aa) | ||||
Sthe_2043 | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family. (219 aa) | ||||
Sthe_2073 | Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: tfu:Tfu_2297 regulatory protein, MarR. (155 aa) | ||||
Sthe_2084 | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: ank:AnaeK_0241 RNA polymerase, sigma-24 subunit, ECF subfamily. (237 aa) | ||||
Sthe_2095 | Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: pfl:PFL_4031 DNA-binding protein. (68 aa) | ||||
Sthe_2119 | Putative transcriptional regulator; PFAM: regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: rca:Rcas_3726 putative transcriptional regulator. (244 aa) | ||||
Sthe_2129 | PFAM: helix-turn-helix HxlR type; transcriptional regulator PadR family protein; KEGG: rlt:Rleg2_5189 transcriptional regulator, HxlR family. (116 aa) | ||||
Sthe_2135 | Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: fal:FRAAL6409 hypothetical protein. (182 aa) | ||||
rex | CoA-binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. (230 aa) | ||||
Sthe_2172 | Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: stp:Strop_3509 regulatory protein, ArsR. (124 aa) | ||||
Sthe_2174 | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: cts:Ctha_1394 RNA polymerase, sigma-24 subunit, ECF subfamily. (182 aa) | ||||
Sthe_2189 | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: rca:Rcas_2697 ECF subfamily RNA polymerase sigma-24 factor. (194 aa) | ||||
Sthe_2190 | KEGG: rca:Rcas_2698 putative transmembrane anti- sigma factor. (396 aa) | ||||
Sthe_2197 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: hau:Haur_0905 two component transcriptional regulator. (236 aa) | ||||
Sthe_2225 | Transcriptional regulator, GntR family with aminotransferase domain protein; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: sth:STH2754 class I aminotransferase protein. (504 aa) | ||||
Sthe_2230 | Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: vvy:VVA0798 hypothetical protein. (71 aa) | ||||
Sthe_2244 | Phage transcriptional regulator, AlpA; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Prophage CP4-57 regulatory; KEGG: sen:SACE_0466 hypothetical protein. (69 aa) | ||||
Sthe_2252 | PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: afw:Anae109_2598 response regulator receiver protein. (124 aa) | ||||
Sthe_2307 | Transcriptional regulator, CdaR; PFAM: GAF domain protein; SMART: GAF domain protein; KEGG: msm:MSMEG_6492 GAF domain protein, putative. (645 aa) | ||||
Sthe_2322 | Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: hau:Haur_1099 ArsR family transcriptional regulator. (358 aa) | ||||
Sthe_2346 | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: rca:Rcas_0988 ECF subfamily RNA polymerase sigma-24 factor. (181 aa) | ||||
Sthe_2348 | TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: sfu:Sfum_0409 transcriptional regulator, AbrB family. (100 aa) | ||||
Sthe_2353 | Transcriptional regulator, LuxR family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; regulatory protein LuxR; sigma-70 region 4 domain protein; KEGG: sth:STH2528 RNA polymerase ECF-type sigma factor. (198 aa) | ||||
Sthe_2376 | PFAM: protein of unknown function DUF28; KEGG: rxy:Rxyl_1318 hypothetical protein. (248 aa) | ||||
Sthe_2385 | PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: lsp:Bsph_2868 hypothetical protein. (140 aa) | ||||
Sthe_2386 | Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bha:BH2086 ArsR family transcriptional regulator. (103 aa) | ||||
Sthe_2390 | PFAM: Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: bld:BLi01191 hypothetical protein. (323 aa) | ||||
Sthe_2441 | PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mxa:MXAN_2962 response regulator. (127 aa) | ||||
Sthe_2526 | Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: scl:sce5225 protein kinase. (799 aa) | ||||
Sthe_2537 | Transcriptional regulator/antitoxin, MazE; KEGG: atc:AGR_C_1711 plasmid stable inheritance protein. (85 aa) | ||||
Sthe_2601 | PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: reh:H16_A1299 transcriptional regulator, IclR- family. (274 aa) | ||||
Sthe_2631 | PFAM: Proline dehydrogenase; KEGG: mxa:MXAN_7405 proline dehydrogenase. (306 aa) | ||||
Sthe_2661 | PFAM: Transcription regulator, AsnC-type-like; KEGG: afw:Anae109_0784 AsnC family transcriptional regulator. (76 aa) | ||||
Sthe_2664 | PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; KEGG: rhi:NGR_b01300 putative HTH-type transcriptional regulator. (173 aa) | ||||
Sthe_2666 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: afw:Anae109_3104 two component transcriptional regulator. (233 aa) | ||||
Sthe_2675 | PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: lhk:LHK_00225 BaeR. (132 aa) | ||||
Sthe_2725 | KEGG: abo:ABO_2712 hypothetical protein. (247 aa) | ||||
Sthe_2735 | PFAM: Transcriptional regulator IclR; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: csa:Csal_0066 IclR family transcriptional regulator. (270 aa) | ||||
Sthe_2783 | PFAM: transcriptional regulator PadR family protein; KEGG: bbt:BBta_0853 PadR family transcriptional regulator. (129 aa) | ||||
Sthe_3462 | PFAM: transcriptional regulator PadR family protein; KEGG: bvi:Bcep1808_0129 PadR family transcriptional regulator. (173 aa) | ||||
Sthe_3494 | Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bxe:Bxe_B2360 GntR family transcriptional regulator. (243 aa) | ||||
Sthe_3502 | PFAM: Proline dehydrogenase; KEGG: mxa:MXAN_7405 proline dehydrogenase. (325 aa) | ||||
Sthe_2796 | Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: gsu:GSU3370 GntR family transcriptional regulator. (248 aa) | ||||
Sthe_2833 | Phage transcriptional regulator, AlpA; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Prophage CP4-57 regulatory; KEGG: vei:Veis_2614 phage transcriptional regulator, AlpA. (71 aa) | ||||
Sthe_2869 | Transcriptional regulator, MerR family; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; GAF domain protein; SMART: GAF domain protein; KEGG: bmj:BMULJ_01800 MerR family transcriptional regulator. (245 aa) | ||||
Sthe_2918 | Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: scl:sce8660 MerR family transcriptional regulator. (269 aa) | ||||
Sthe_2937 | Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: afr:AFE_2796 transcriptional regulator, ArsR family. (235 aa) | ||||
Sthe_2955 | Putative RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; Tetratricopeptide TPR_2 repeat protein; KEGG: pap:PSPA7_4032 ECF subfamily RNA polymerase sigma factor. (418 aa) | ||||
Sthe_2978 | Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: nmn:NMCC_1944 ferric uptake regulation protein; Belongs to the Fur family. (144 aa) | ||||
Sthe_2984 | Transcriptional regulator, MerR family; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: tgr:Tgr7_2809 putative transcriptional regulator, MerR family. (164 aa) | ||||
Sthe_3010 | Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: dal:Dalk_3679 transcriptional regulator, ArsR family. (134 aa) | ||||
Sthe_3042 | Transcriptional regulator, RpiR family; PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: eta:ETA_32910 putative transcriptional regulator. (290 aa) | ||||
Sthe_3049 | PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ade:Adeh_3844 response regulator receiver domain-containing protein. (125 aa) | ||||
Sthe_3067 | Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: afw:Anae109_3644 regulatory protein ArsR. (102 aa) | ||||
Sthe_3081 | CheA signal transduction histidine kinase; KEGG: sml:Smlt3670 putative gliding motility sensor histidine kinase response regulator fusion transcriptional regulatory protein; PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein. (1032 aa) | ||||
Sthe_3104 | Hypothetical protein. (241 aa) | ||||
Sthe_3127 | Two component transcriptional regulator, winged helix family; PFAM: transcriptional regulator domain protein; response regulator receiver; SMART: response regulator receiver; KEGG: hch:HCH_00579 response regulator. (256 aa) | ||||
Sthe_3130 | RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (359 aa) | ||||
Sthe_3158 | Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: esa:ESA_00782 transcriptional regulator NarP. (214 aa) | ||||
Sthe_3164 | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: acp:A2cp1_3324 RNA polymerase, sigma-24 subunit, ECF subfamily. (307 aa) | ||||
Sthe_3183 | PFAM: Cupin 2 conserved barrel domain protein; KEGG: ret:RHE_CH03293 hypothetical protein. (143 aa) | ||||
Sthe_3197 | RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: mxa:MXAN_3686 ECF subfamily RNA polymerase sigma factor. (193 aa) | ||||
Sthe_3198 | PFAM: Anti-sigma-K factor RskA; KEGG: ank:AnaeK_0242 Fe-S oxidoreductase. (256 aa) | ||||
Sthe_3218 | Two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; KEGG: ank:AnaeK_0902 two component transcriptional regulator, LuxR family. (209 aa) | ||||
Sthe_3240 | PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; KEGG: rhi:NGR_b01300 putative HTH-type transcriptional regulator. (176 aa) | ||||
Sthe_3241 | Two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: xca:xccb100_2001 two-component system regulatory protein, LuxR family. (212 aa) | ||||
Sthe_3271 | TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: noc:Noc_2206 AbrB family transcriptional regulator. (79 aa) | ||||
Sthe_3273 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: smd:Smed_5362 two component transcriptional regulator. (232 aa) | ||||
Sthe_3284 | Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: har:HEAR1907 osmolarity response regulator. (310 aa) | ||||
Sthe_3286 | Putative transcriptional regulator, GntR family; PFAM: aminotransferase class I and II; KEGG: reh:H16_A2662 transcriptional regulator, MocR family. (405 aa) | ||||
Sthe_3316 | KEGG: scl:sce5225 protein kinase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; TPR repeat- containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: GGDEF domain containing protein; Tetratricopeptide repeat. (907 aa) | ||||
Sthe_3327 | KEGG: scl:sce5225 protein kinase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; TPR repeat- containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: GGDEF domain containing protein; Tetratricopeptide repeat. (1156 aa) | ||||
Sthe_3333 | Transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bmt:BSUIS_B1410 hypothetical protein. (261 aa) |