STRINGSTRING
Sthe_3494 Sthe_3494 Sthe_3333 Sthe_3333 Sthe_2796 Sthe_2796 Sthe_2225 Sthe_2225 Sthe_0681 Sthe_0681 Sthe_0285 Sthe_0285 Sthe_0265 Sthe_0265 Sthe_0005 Sthe_0005
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sthe_3494Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bxe:Bxe_B2360 GntR family transcriptional regulator. (243 aa)
Sthe_3333Transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: bmt:BSUIS_B1410 hypothetical protein. (261 aa)
Sthe_2796Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: gsu:GSU3370 GntR family transcriptional regulator. (248 aa)
Sthe_2225Transcriptional regulator, GntR family with aminotransferase domain protein; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: sth:STH2754 class I aminotransferase protein. (504 aa)
Sthe_0681PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rxy:Rxyl_0929 transcriptional regulator, GntR family. (264 aa)
Sthe_0285Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: nfa:nfa3720 putative transcriptional regulator. (122 aa)
Sthe_0265Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: msm:MSMEG_4057 transcriptional regulator, GntR family protein. (224 aa)
Sthe_0005Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: cau:Caur_2267 GntR domain-containing protein. (246 aa)
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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