STRINGSTRING
panC panC Sthe_1472 Sthe_1472 Sthe_1639 Sthe_1639 Sthe_1665 Sthe_1665 Sthe_2576 Sthe_2576 Sthe_2873 Sthe_2873 Sthe_2929 Sthe_2929 Sthe_2982 Sthe_2982
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
panCPantoate/beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. (280 aa)
Sthe_1472PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sit:TM1040_3030 short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (254 aa)
Sthe_1639Acetylornithine transaminase; PFAM: aminotransferase class-III; KEGG: rca:Rcas_3219 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (426 aa)
Sthe_1665PFAM: aminotransferase class-III; KEGG: sma:SAV_4551 hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (452 aa)
Sthe_2576PFAM: Enoyl-CoA hydratase/isomerase; KEGG: ara:Arad_0598 enoyl-CoA hydratase protein; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)
Sthe_2873PFAM: aminotransferase class-III; KEGG: smd:Smed_5339 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (451 aa)
Sthe_2929TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bch:Bcen2424_6618 dihydropyrimidinase. (473 aa)
Sthe_2982PFAM: Copper amine oxidase; Copper amine oxidase N3-terminal; Copper amine oxidase N2-terminal; KEGG: ara:Arad_9757 hypothetical protein. (646 aa)
Your Current Organism:
Sphaerobacter thermophilus
NCBI taxonomy Id: 479434
Other names: S. thermophilus DSM 20745, Sphaerobacter thermophilus DSM 20745, Sphaerobacter thermophilus str. DSM 20745, Sphaerobacter thermophilus strain DSM 20745
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