STRINGSTRING
Kfla_4962 Kfla_4962 Kfla_5891 Kfla_5891 Kfla_4961 Kfla_4961 Kfla_6088 Kfla_6088
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Kfla_4962TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Citrate synthase; regulatory protein MerR; KEGG: bja:bll0182 citrate synthase. (431 aa)
Kfla_5891PFAM: Citrate synthase; KEGG: pzu:PHZ_c0162 citrate synthase GltA; Belongs to the citrate synthase family. (370 aa)
Kfla_4961PFAM: Citrate synthase; KEGG: afr:AFE_3065 citrate synthase; Belongs to the citrate synthase family. (385 aa)
Kfla_6088KEGG: mxa:MXAN_3519 citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; Belongs to the citrate synthase family. (428 aa)
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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