48 items (Schistosoma margrebowiei) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A183MTG7	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family. (138 aa)
	A0A183MT24	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
	A0A183MQA7	Uncharacterized protein. (536 aa)
	A0A183MPT9	Uncharacterized protein. (122 aa)
	A0A183MPT4	Ribosomal_L2_C domain-containing protein. (259 aa)
	A0A183MM13	Uncharacterized protein. (160 aa)
	A0A183MLA5	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family. (106 aa)
	A0A183MIZ3	Uncharacterized protein. (44 aa)
	A0A183MGH1	Uncharacterized protein. (120 aa)
	A0A183MFL1	Uncharacterized protein. (375 aa)
	A0A183MDM0	Uncharacterized protein. (155 aa)
	A0A183MBN9	Uncharacterized protein. (142 aa)
	A0A183MA77	Integrase catalytic domain-containing protein. (627 aa)
	A0A183L8L8	Uncharacterized protein. (136 aa)
	A0A183M9C7	Uncharacterized protein. (515 aa)
	A0A183M7E8	Ribosomal_L16 domain-containing protein. (221 aa)
	A0A183M2X8	Ribosomal_L19e domain-containing protein. (186 aa)
	SMRZ_LOCUS9153	Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family. (165 aa)
	SMRZ_LOCUS8540	60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family. (171 aa)
	SMRZ_LOCUS8100	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family. (69 aa)
	SMRZ_LOCUS7815	Ubiquitin-like domain-containing protein. (128 aa)
	A0A183LUX1	Uncharacterized protein. (228 aa)
	SMRZ_LOCUS7539	Uncharacterized protein. (121 aa)
	SMRZ_LOCUS7320	Uncharacterized protein. (98 aa)
	SMRZ_LOCUS7287	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (311 aa)
	SMRZ_LOCUS6877	Uncharacterized protein. (186 aa)
	SMRZ_LOCUS6860	Uncharacterized protein. (197 aa)
	A0A183LSE2	Ribosomal_L7Ae domain-containing protein. (278 aa)
	SMRZ_LOCUS6397	Ribos_L4_asso_C domain-containing protein. (375 aa)
	SMRZ_LOCUS5473	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family. (113 aa)
	SMRZ_LOCUS4775	Uncharacterized protein. (122 aa)
	SMRZ_LOCUS4060	Ribosomal_L18_c domain-containing protein. (299 aa)
	SMRZ_LOCUS1956	Uncharacterized protein. (189 aa)
	SMRZ_LOCUS1522	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family. (180 aa)
	SMRZ_LOCUS212	Uncharacterized protein. (1162 aa)
	A0A183NCU5	Uncharacterized protein. (268 aa)
	A0A183NC91	Uncharacterized protein. (99 aa)
	A0A183NAH6	Uncharacterized protein. (186 aa)
	A0A183N905	Ribosomal_L14e domain-containing protein. (146 aa)
	A0A183N521	Ribosomal_L28e domain-containing protein. (114 aa)
	A0A183MZA7	Ribosomal_L23eN domain-containing protein. (197 aa)
	A0A183MWN8	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (415 aa)
	A0A183MWM2	TRASH domain-containing protein. (142 aa)
	A0A183MWD8	Uncharacterized protein. (124 aa)
	A0A183MV57	Uncharacterized protein. (209 aa)
	A0A183MUZ0	Ribosomal_L7Ae domain-containing protein. (111 aa)
	A0A183MU13	Uncharacterized protein. (209 aa)
	A0A183MTJ9	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)

Your Current Organism:

Schistosoma margrebowiei

NCBI taxonomy Id: 48269
Other names: S. margrebowiei

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183L8L8	A0A183LSE2	A0A183L8L8	A0A183LSE2	Uncharacterized protein.	Ribosomal_L7Ae domain-containing protein.	0.999
A0A183L8L8	A0A183LUX1	A0A183L8L8	A0A183LUX1	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A183L8L8	A0A183M2X8	A0A183L8L8	A0A183M2X8	Uncharacterized protein.	Ribosomal_L19e domain-containing protein.	0.999
A0A183L8L8	A0A183M7E8	A0A183L8L8	A0A183M7E8	Uncharacterized protein.	Ribosomal_L16 domain-containing protein.	0.999
A0A183L8L8	A0A183M9C7	A0A183L8L8	A0A183M9C7	Uncharacterized protein.	Uncharacterized protein.	0.995
A0A183L8L8	A0A183MA77	A0A183L8L8	A0A183MA77	Uncharacterized protein.	Integrase catalytic domain-containing protein.	0.995
A0A183L8L8	A0A183MBN9	A0A183L8L8	A0A183MBN9	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A183L8L8	A0A183MDM0	A0A183L8L8	A0A183MDM0	Uncharacterized protein.	Uncharacterized protein.	0.979
A0A183L8L8	A0A183MFL1	A0A183L8L8	A0A183MFL1	Uncharacterized protein.	Uncharacterized protein.	0.958
A0A183L8L8	A0A183MGH1	A0A183L8L8	A0A183MGH1	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A183L8L8	A0A183MIZ3	A0A183L8L8	A0A183MIZ3	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A183L8L8	A0A183MLA5	A0A183L8L8	A0A183MLA5	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.	0.999
A0A183L8L8	A0A183MM13	A0A183L8L8	A0A183MM13	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A183L8L8	A0A183MPT4	A0A183L8L8	A0A183MPT4	Uncharacterized protein.	Ribosomal_L2_C domain-containing protein.	0.997
A0A183L8L8	A0A183MPT9	A0A183L8L8	A0A183MPT9	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A183L8L8	A0A183MQA7	A0A183L8L8	A0A183MQA7	Uncharacterized protein.	Uncharacterized protein.	0.997
A0A183L8L8	A0A183MT24	A0A183L8L8	A0A183MT24	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein P1/P2 family.	0.999
A0A183L8L8	A0A183MTG7	A0A183L8L8	A0A183MTG7	Uncharacterized protein.	Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.	0.999
A0A183L8L8	A0A183MTJ9	A0A183L8L8	A0A183MTJ9	Uncharacterized protein.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
A0A183L8L8	A0A183MU13	A0A183L8L8	A0A183MU13	Uncharacterized protein.	Uncharacterized protein.	0.999