STRINGSTRING
SDE43717.1 SDE43717.1 SDE60151.1 SDE60151.1 SDF22204.1 SDF22204.1 SDF32087.1 SDF32087.1 SDF43668.1 SDF43668.1 SDF47705.1 SDF47705.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDE43717.1Winged helix-turn helix. (105 aa)
SDE60151.1Winged helix-turn helix. (107 aa)
SDF22204.1DDE superfamily endonuclease. (101 aa)
SDF32087.1Winged helix-turn helix. (104 aa)
SDF43668.1DDE superfamily endonuclease. (103 aa)
SDF47705.1DDE superfamily endonuclease. (110 aa)
Your Current Organism:
Thermus arciformis
NCBI taxonomy Id: 482827
Other names: CGMCC 1.6992, JCM 15153, T. arciformis, Thermus arciformis Zhang et al. 2010, Thermus sp. TH91, Thermus sp. TH92, strain TH92
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