STRINGSTRING
SDE43717.1 SDE43717.1 SDE39982.1 SDE39982.1 SDE60151.1 SDE60151.1 SDE83840.1 SDE83840.1 SDE88252.1 SDE88252.1 SDF54115.1 SDF54115.1 SDE97155.1 SDE97155.1 SDE98883.1 SDE98883.1 SDF06988.1 SDF06988.1 SDF12009.1 SDF12009.1 SDF38061.1 SDF38061.1 SDF39847.1 SDF39847.1 SDF43508.1 SDF43508.1 SDF50108.1 SDF50108.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDE43717.1Winged helix-turn helix. (105 aa)
SDE39982.1Uncharacterized conserved protein, DUF433 family. (75 aa)
SDE60151.1Winged helix-turn helix. (107 aa)
SDE83840.1Transcriptional regulator, TetR family. (203 aa)
SDE88252.1Uncharacterized conserved protein, DUF433 family. (101 aa)
SDF54115.1Putative transposase. (73 aa)
SDE97155.1Uncharacterized conserved protein, DUF433 family. (61 aa)
SDE98883.1Transposase. (93 aa)
SDF06988.1Transcriptional regulator, TetR family. (196 aa)
SDF12009.1Transcriptional regulator, TetR family. (186 aa)
SDF38061.1Transposase. (157 aa)
SDF39847.1Transcriptional regulator, TetR family. (178 aa)
SDF43508.1Transcriptional regulator, TetR family. (204 aa)
SDF50108.1Transcriptional regulator, TetR family. (190 aa)
Your Current Organism:
Thermus arciformis
NCBI taxonomy Id: 482827
Other names: CGMCC 1.6992, JCM 15153, T. arciformis, Thermus arciformis Zhang et al. 2010, Thermus sp. TH91, Thermus sp. TH92, strain TH92
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