STRINGSTRING
SDF36148.1 SDF36148.1 SDF36552.1 SDF36552.1 SDF38061.1 SDF38061.1 SDF38090.1 SDF38090.1 SDF40076.1 SDF40076.1 SDF41429.1 SDF41429.1 SDF43444.1 SDF43444.1 SDF43668.1 SDF43668.1 SDF44958.1 SDF44958.1 SDF45208.1 SDF45208.1 SDF45471.1 SDF45471.1 SDF45509.1 SDF45509.1 SDF45730.1 SDF45730.1 SDF46178.1 SDF46178.1 SDF46922.1 SDF46922.1 SDF47705.1 SDF47705.1 SDF48490.1 SDF48490.1 SDF48835.1 SDF48835.1 SDF48874.1 SDF48874.1 SDF49640.1 SDF49640.1 SDF50621.1 SDF50621.1 SDF54287.1 SDF54287.1 SDF54319.1 SDF54319.1 SDF54962.1 SDF54962.1 SDE90911.1 SDE90911.1 SDE91076.1 SDE91076.1 SDE89709.1 SDE89709.1 SDE92678.1 SDE92678.1 SDE92705.1 SDE92705.1 SDE92757.1 SDE92757.1 SDE92784.1 SDE92784.1 SDE92810.1 SDE92810.1 SDE92836.1 SDE92836.1 SDE93017.1 SDE93017.1 SDE96943.1 SDE96943.1 SDE96498.1 SDE96498.1 SDE97182.1 SDE97182.1 SDE96518.1 SDE96518.1 SDE98806.1 SDE98806.1 SDE98956.1 SDE98956.1 SDE99802.1 SDE99802.1 SDF00463.1 SDF00463.1 SDF00493.1 SDF00493.1 SDF01203.1 SDF01203.1 SDF02457.1 SDF02457.1 SDF05368.1 SDF05368.1 SDF06581.1 SDF06581.1 SDF07020.1 SDF07020.1 mnmG mnmG dnaA dnaA SDF07997.1 SDF07997.1 SDF10050.1 SDF10050.1 SDF10023.1 SDF10023.1 SDF12639.1 SDF12639.1 SDF13240.1 SDF13240.1 SDF13851.1 SDF13851.1 SDF14730.1 SDF14730.1 SDF15145.1 SDF15145.1 SDF15180.1 SDF15180.1 SDF15510.1 SDF15510.1 SDF15740.1 SDF15740.1 SDF15771.1 SDF15771.1 SDF17596.1 SDF17596.1 SDF18073.1 SDF18073.1 SDF18660.1 SDF18660.1 SDF18692.1 SDF18692.1 SDF18917.1 SDF18917.1 SDF18944.1 SDF18944.1 SDF18247.1 SDF18247.1 SDF19850.1 SDF19850.1 SDF20930.1 SDF20930.1 SDF21804.1 SDF21804.1 SDF22204.1 SDF22204.1 SDF22510.1 SDF22510.1 SDF22538.1 SDF22538.1 SDF22568.1 SDF22568.1 SDF22626.1 SDF22626.1 SDF22830.1 SDF22830.1 SDF22943.1 SDF22943.1 SDF22423.1 SDF22423.1 SDF23443.1 SDF23443.1 SDF23477.1 SDF23477.1 SDF24780.1 SDF24780.1 SDF26750.1 SDF26750.1 SDF26204.1 SDF26204.1 SDF26227.1 SDF26227.1 SDF27308.1 SDF27308.1 SDF27448.1 SDF27448.1 SDF27743.1 SDF27743.1 SDF27153.1 SDF27153.1 SDF28245.1 SDF28245.1 SDF28984.1 SDF28984.1 SDF30489.1 SDF30489.1 SDF29596.1 SDF29596.1 SDF30970.1 SDF30970.1 SDF32087.1 SDF32087.1 mnmE mnmE SDF33818.1 SDF33818.1 SDE41252.1 SDE41252.1 SDE41603.1 SDE41603.1 SDE41635.1 SDE41635.1 SDE43074.1 SDE43074.1 SDE43579.1 SDE43579.1 SDE43608.1 SDE43608.1 SDE43717.1 SDE43717.1 SDE38861.1 SDE38861.1 SDE39387.1 SDE39387.1 SDE40430.1 SDE40430.1 SDE40455.1 SDE40455.1 SDE50587.1 SDE50587.1 SDE48679.1 SDE48679.1 SDE46604.1 SDE46604.1 SDE51314.1 SDE51314.1 SDE54736.1 SDE54736.1 SDE54814.1 SDE54814.1 SDE54840.1 SDE54840.1 SDE54939.1 SDE54939.1 SDE51346.1 SDE51346.1 SDE52334.1 SDE52334.1 SDE52423.1 SDE52423.1 SDE52508.1 SDE52508.1 SDE52728.1 SDE52728.1 SDE52982.1 SDE52982.1 SDE59002.1 SDE59002.1 SDE56630.1 SDE56630.1 radA radA SDE58747.1 SDE58747.1 SDE58776.1 SDE58776.1 SDE60151.1 SDE60151.1 SDE63185.1 SDE63185.1 SDE60552.1 SDE60552.1 SDE60655.1 SDE60655.1 SDE60951.1 SDE60951.1 SDE60981.1 SDE60981.1 SDE61010.1 SDE61010.1 SDE61143.1 SDE61143.1 SDE61571.1 SDE61571.1 SDE67636.1 SDE67636.1 SDE69867.1 SDE69867.1 SDE70102.1 SDE70102.1 SDE70135.1 SDE70135.1 SDE70499.1 SDE70499.1 SDE71509.1 SDE71509.1 infB infB SDE75121.1 SDE75121.1 SDE75140.1 SDE75140.1 SDE75906.1 SDE75906.1 SDE76042.1 SDE76042.1 SDE76071.1 SDE76071.1 SDE76147.1 SDE76147.1 SDE76360.1 SDE76360.1 SDE78353.1 SDE78353.1 SDE78985.1 SDE78985.1 SDE80917.1 SDE80917.1 SDE81026.1 SDE81026.1 SDE81055.1 SDE81055.1 SDE82318.1 SDE82318.1 SDE83182.1 SDE83182.1 SDE83438.1 SDE83438.1 SDE84915.1 SDE84915.1 SDE88304.1 SDE88304.1 SDE89740.1 SDE89740.1 SDE90882.1 SDE90882.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDF36148.1Hypothetical protein. (263 aa)
SDF36552.1Alkaline phosphatase; Belongs to the alkaline phosphatase family. (503 aa)
SDF38061.1Transposase. (157 aa)
SDF38090.1Hypothetical protein. (96 aa)
SDF40076.1Hypothetical protein. (347 aa)
SDF41429.1Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (150 aa)
SDF43444.1Hypothetical protein. (131 aa)
SDF43668.1DDE superfamily endonuclease. (103 aa)
SDF44958.1Hypothetical protein. (85 aa)
SDF45208.1Hypothetical protein. (108 aa)
SDF45471.1Two component transcriptional regulator, LuxR family. (205 aa)
SDF45509.1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (546 aa)
SDF45730.1Transposase. (93 aa)
SDF46178.1Transposase. (97 aa)
SDF46922.1Predicted Fe-Mo cluster-binding protein, NifX family. (110 aa)
SDF47705.1DDE superfamily endonuclease. (110 aa)
SDF48490.1Plasmid replication initiator protein. (456 aa)
SDF48835.1Signal transduction histidine kinase. (404 aa)
SDF48874.1Two component transcriptional regulator, winged helix family. (218 aa)
SDF49640.1Winged helix-turn helix. (102 aa)
SDF50621.1Hypothetical protein. (85 aa)
SDF54287.1Hypothetical protein. (164 aa)
SDF54319.1Hypothetical protein. (86 aa)
SDF54962.1Hypothetical protein. (63 aa)
SDE90911.1Threonine/homoserine efflux transporter RhtA. (270 aa)
SDE91076.1Endoglucanase. (343 aa)
SDE89709.1Signal transduction histidine kinase. (404 aa)
SDE92678.1CRP/FNR family transcriptional regulator, anaerobic regulatory protein. (213 aa)
SDE92705.1GAF domain-containing protein. (599 aa)
SDE92757.1Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1196 aa)
SDE92784.1Respiratory nitrate reductase beta subunit. (511 aa)
SDE92810.1Respiratory nitrate reductase chaperone NarJ. (171 aa)
SDE92836.1Nitrate reductase gamma subunit. (225 aa)
SDE93017.1Hypothetical protein. (383 aa)
SDE96943.1Two component transcriptional regulator, LuxR family. (193 aa)
SDE96498.1Hypothetical protein. (323 aa)
SDE97182.1acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)
SDE96518.1Hypothetical protein. (66 aa)
SDE98806.1cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. (195 aa)
SDE98956.1Deoxyribodipyrimidine photo-lyase type I; Belongs to the DNA photolyase family. (420 aa)
SDE99802.1Hypothetical protein. (106 aa)
SDF00463.1Hypothetical protein. (91 aa)
SDF00493.1Adenine-specific DNA-methyltransferase. (416 aa)
SDF01203.1Cytochrome c7. (211 aa)
SDF02457.1Hypothetical protein. (113 aa)
SDF05368.1Putative transposase. (178 aa)
SDF06581.1Phosphate ABC transporter substrate-binding protein, PhoT family (TC 3.A.1.7.1); Belongs to the PstS family. (352 aa)
SDF07020.1Phage shock protein A (PspA) family protein. (220 aa)
mnmGtRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. (596 aa)
dnaAChromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. (445 aa)
SDF07997.1Phosphoenolpyruvate synthase. (254 aa)
SDF10050.1TRAP transporter, DctM subunit. (491 aa)
SDF10023.1TRAP-type mannitol/chloroaromatic compound transport system, small permease component. (179 aa)
SDF12639.1Hypothetical protein. (101 aa)
SDF13240.1Hypothetical protein. (91 aa)
SDF13851.1Protein of unknown function. (345 aa)
SDF14730.1Hypothetical protein. (68 aa)
SDF15145.1Ammonium transporter. (446 aa)
SDF15180.1Nitrogen regulatory protein P-II family; Belongs to the P(II) protein family. (116 aa)
SDF15510.1Tetratricopeptide repeat-containing protein. (189 aa)
SDF15740.1Sodium transport system ATP-binding protein. (238 aa)
SDF15771.1Sodium transport system permease protein. (392 aa)
SDF17596.1Hypothetical protein. (108 aa)
SDF18073.1Hypothetical protein. (90 aa)
SDF18660.1TRAP transporter, 4TM/12TM fusion protein. (650 aa)
SDF18692.1Hypothetical protein. (315 aa)
SDF18917.1Cytoskeleton protein RodZ. (289 aa)
SDF18944.1Hypothetical protein. (98 aa)
SDF18247.1Transcriptional regulator. (198 aa)
SDF19850.1Serine protease, S1-C subfamily, contains C-terminal PDZ domain. (348 aa)
SDF20930.1Hypothetical protein. (105 aa)
SDF21804.1Hypothetical protein. (100 aa)
SDF22204.1DDE superfamily endonuclease. (101 aa)
SDF22510.1Hypothetical protein. (329 aa)
SDF22538.1TRAP transporter, 4TM/12TM fusion protein. (705 aa)
SDF22568.1Hypothetical protein. (333 aa)
SDF22626.1Serine protease, S1-C subfamily, contains C-terminal PDZ domain. (405 aa)
SDF22830.1Hypothetical protein. (134 aa)
SDF22943.1L-glutamine synthetase. (446 aa)
SDF22423.1UDP-N-Acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. (372 aa)
SDF23443.1Hypothetical protein. (115 aa)
SDF23477.1Hypothetical protein. (245 aa)
SDF24780.1Hypothetical protein. (488 aa)
SDF26750.1Hypothetical protein. (96 aa)
SDF26204.1Molybdopterin oxidoreductase Fe4S4 domain-containing protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1129 aa)
SDF26227.1Protoglobin. (183 aa)
SDF27308.1tRNA-U16,U17-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily. (342 aa)
SDF27448.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (224 aa)
SDF27743.1Hypothetical protein. (415 aa)
SDF27153.1Threonine/homoserine efflux transporter RhtA. (276 aa)
SDF28245.1Hypothetical protein. (97 aa)
SDF28984.1Hypothetical protein. (81 aa)
SDF30489.1Transposase DDE domain-containing protein. (91 aa)
SDF29596.1Protein of unknown function. (253 aa)
SDF30970.1Hypothetical protein. (108 aa)
SDF32087.1Winged helix-turn helix. (104 aa)
mnmEtRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (432 aa)
SDF33818.1Diguanylate cyclase (GGDEF) domain-containing protein. (239 aa)
SDE41252.1Protein of unknown function. (88 aa)
SDE41603.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (214 aa)
SDE41635.1Two-component system, OmpR family, sensor histidine kinase TctE. (434 aa)
SDE43074.1Two-component system, OmpR family, sensor histidine kinase BaeS. (364 aa)
SDE43579.1Signal transduction histidine kinase. (721 aa)
SDE43608.1Two-component system, OmpR family, phosphate regulon response regulator PhoB. (120 aa)
SDE43717.1Winged helix-turn helix. (105 aa)
SDE38861.1Drug/metabolite transporter, DME family. (277 aa)
SDE39387.1cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. (206 aa)
SDE40430.1Hypothetical protein. (468 aa)
SDE40455.1Two component transcriptional regulator, winged helix family. (224 aa)
SDE50587.1Hypothetical protein. (112 aa)
SDE48679.1Alanine or glycine:cation symporter, AGCS family. (451 aa)
SDE46604.1Glucose inhibited division protein A. (232 aa)
SDE51314.1Hypothetical protein. (108 aa)
SDE54736.1Hypothetical protein. (120 aa)
SDE54814.1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (515 aa)
SDE54840.1Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (161 aa)
SDE54939.1Hypothetical protein. (93 aa)
SDE51346.1Response regulator receiver domain-containing protein. (249 aa)
SDE52334.1Serine protease, S1-C subfamily, contains C-terminal PDZ domain. (334 aa)
SDE52423.1Ferrous iron transport protein A. (77 aa)
SDE52508.1Diguanylate cyclase (GGDEF) domain-containing protein. (851 aa)
SDE52728.1Hypothetical protein. (248 aa)
SDE52982.1Hypothetical protein. (185 aa)
SDE59002.1His Kinase A (phospho-acceptor) domain-containing protein. (327 aa)
SDE56630.1Permease of the drug/metabolite transporter (DMT) superfamily. (284 aa)
radADNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (425 aa)
SDE58747.1Outer membrane efflux protein. (321 aa)
SDE58776.1Outer membrane protein TolC. (421 aa)
SDE60151.1Winged helix-turn helix. (107 aa)
SDE63185.1Hypothetical protein. (91 aa)
SDE60552.1Hypothetical protein. (100 aa)
SDE60655.1Malate dehydrogenase (oxaloacetate-decarboxylating). (575 aa)
SDE60951.1Chaperone TorD involved in molybdoenzyme TorA maturation. (175 aa)
SDE60981.1Two component transcriptional regulator, LuxR family. (198 aa)
SDE61010.1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (322 aa)
SDE61143.1EamA-like transporter family protein. (275 aa)
SDE61571.1Translation factor SUA5; Belongs to the SUA5 family. (174 aa)
SDE67636.1Hypothetical protein. (91 aa)
SDE69867.1Regulatory protein, luxR family. (172 aa)
SDE70102.1PAS/PAC sensor signal transduction histidine kinase. (964 aa)
SDE70135.1Response regulator receiver domain-containing protein. (125 aa)
SDE70499.1Purine catabolism regulatory protein. (461 aa)
SDE71509.1DDE superfamily endonuclease. (96 aa)
infBBacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. (571 aa)
SDE75121.1Signal transduction histidine kinase. (299 aa)
SDE75140.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (225 aa)
SDE75906.1Type I restriction enzyme M protein. (528 aa)
SDE76042.1Hypothetical protein. (419 aa)
SDE76071.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (227 aa)
SDE76147.1cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. (202 aa)
SDE76360.1Two component transcriptional regulator, LuxR family. (217 aa)
SDE78353.1Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. (394 aa)
SDE78985.1Hypothetical protein. (87 aa)
SDE80917.1Copper chaperone. (66 aa)
SDE81026.1Two component transcriptional regulator, winged helix family. (225 aa)
SDE81055.1Histidine kinase. (373 aa)
SDE82318.1Omega-6 fatty acid desaturase (delta-12 desaturase). (350 aa)
SDE83182.1Hypothetical protein. (246 aa)
SDE83438.1MFS transporter, putative metabolite:H+ symporter. (433 aa)
SDE84915.1CRP/FNR family transcriptional regulator, anaerobic regulatory protein. (216 aa)
SDE88304.1Protein of unknown function. (192 aa)
SDE89740.1Two component transcriptional regulator, winged helix family. (219 aa)
SDE90882.1EamA-like transporter family protein. (295 aa)
Your Current Organism:
Thermus arciformis
NCBI taxonomy Id: 482827
Other names: CGMCC 1.6992, JCM 15153, T. arciformis, Thermus arciformis Zhang et al. 2010, Thermus sp. TH91, Thermus sp. TH92, strain TH92
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