(10 nodes) Mixed, incl. Ribosomal protein S30, and Ribosomal protein S4/S9 network (Absidia glauca)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A163JBC3	Ribosomal_L7Ae domain-containing protein. (110 aa)
	A0A163JZS2	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family. (136 aa)
	A0A163K1D1	Ribosomal_S17_N domain-containing protein. (152 aa)
	A0A163K6R8	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family. (190 aa)
	A0A163TF52	Uncharacterized protein. (109 aa)
	A0A168M061	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (95 aa)
	A0A168N7L4	Uncharacterized protein. (463 aa)
	A0A168NCW0	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family. (204 aa)
	A0A168QMB8	Uncharacterized protein. (160 aa)
	A0A168QY71	Uncharacterized protein. (93 aa)

Your Current Organism:

Absidia glauca

NCBI taxonomy Id: 4829
Other names: A. glauca, CBS 101.08, MUCL 10044

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A163JBC3	A0A163JZS2	Ribosomal_L7Ae domain-containing protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999
A0A163JBC3	A0A163K1D1	Ribosomal_L7Ae domain-containing protein.	Ribosomal_S17_N domain-containing protein.	0.999
A0A163JBC3	A0A163K6R8	Ribosomal_L7Ae domain-containing protein.	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.	0.999
A0A163JBC3	A0A163TF52	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein.	0.999
A0A163JBC3	A0A168M061	Ribosomal_L7Ae domain-containing protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.998
A0A163JBC3	A0A168N7L4	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein.	0.999
A0A163JBC3	A0A168NCW0	Ribosomal_L7Ae domain-containing protein.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
A0A163JBC3	A0A168QMB8	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein.	0.998
A0A163JBC3	A0A168QY71	Ribosomal_L7Ae domain-containing protein.	Uncharacterized protein.	0.998
A0A163JZS2	A0A163JBC3	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	Ribosomal_L7Ae domain-containing protein.	0.999
A0A163JZS2	A0A163K1D1	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	Ribosomal_S17_N domain-containing protein.	0.999
A0A163JZS2	A0A163K6R8	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	S4 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS4 family.	0.999
A0A163JZS2	A0A163TF52	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	Uncharacterized protein.	0.999
A0A163JZS2	A0A168M061	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.998
A0A163JZS2	A0A168N7L4	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	Uncharacterized protein.	0.999
A0A163JZS2	A0A168NCW0	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.	0.999
A0A163JZS2	A0A168QMB8	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	Uncharacterized protein.	0.998
A0A163JZS2	A0A168QY71	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	Uncharacterized protein.	0.997
A0A163K1D1	A0A163JBC3	Ribosomal_S17_N domain-containing protein.	Ribosomal_L7Ae domain-containing protein.	0.999
A0A163K1D1	A0A163JZS2	Ribosomal_S17_N domain-containing protein.	60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.	0.999