STRINGSTRING
metN metN mlaE mlaE lptB lptB EEC55658.1 EEC55658.1 EEC55539.1 EEC55539.1 EEC55406.1 EEC55406.1 EEC54708.1 EEC54708.1 yfiO yfiO yocK yocK lspA lspA EEC53085.1 EEC53085.1 EEC53087.1 EEC53087.1 EEC53112.1 EEC53112.1 EEC52637.1 EEC52637.1 EEC52786.1 EEC52786.1 EEC52288.1 EEC52288.1 lepB_1 lepB_1 lepB lepB EEC52407.1 EEC52407.1 EEC52481.1 EEC52481.1 EEC52209.1 EEC52209.1 ompH ompH yaeT yaeT EEC52095.1 EEC52095.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
metNABC transporter, ATP-binding protein; KEGG: rru:Rru_A0407 7.3e-42 ABC transporter component K02065. (256 aa)
mlaEHypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (247 aa)
lptBABC transporter, ATP-binding protein; KEGG: cch:Cag_0251 1.5e-75 ATPase; Psort location: Cytoplasmic, score: 9.12. (252 aa)
EEC55658.1Hypothetical protein. (525 aa)
EEC55539.1Hypothetical protein. (297 aa)
EEC55406.1Hypothetical protein; Psort location: OuterMembrane, score: 9.49. (910 aa)
EEC54708.1Tetratricopeptide repeat protein. (227 aa)
yfiOOuter membrane assembly lipoprotein YfiO. (267 aa)
yocKPutative RNA polymerase-binding protein DksA; Psort location: Cytoplasmic, score: 8.96. (126 aa)
lspAPutative signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. (209 aa)
EEC53085.1Hypothetical protein. (312 aa)
EEC53087.1Outer membrane protein, OMP85 family; Psort location: CytoplasmicMembrane, score: 9.96. (770 aa)
EEC53112.1Permease, YjgP/YjgQ family; Psort location: CytoplasmicMembrane, score: 10.00. (380 aa)
EEC52637.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (73 aa)
EEC52786.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (836 aa)
EEC52288.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (1114 aa)
lepB_1KEGG: bfr:BF0180 3.9e-114 signal peptidase I K03100; Belongs to the peptidase S26 family. (312 aa)
lepBKEGG: bth:BT3319 5.0e-233 signal peptidase I K03100; Psort location: CytoplasmicMembrane, score: 9.82. (494 aa)
EEC52407.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (423 aa)
EEC52481.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (193 aa)
EEC52209.1Outer membrane protein. (168 aa)
ompHOuter membrane protein; KEGG: gka:GK3362 0.0094 F0F1-type ATP synthaseB chain K02109. (164 aa)
yaeTOuter membrane protein assembly complex, YaeT protein; KEGG: pfl:PFL_5589 0.0052 rpoB; DNA-directed RNA polymerase, beta subunit K03043; Psort location: OuterMembrane, score: 9.92. (879 aa)
EEC52095.1Permease, YjgP/YjgQ family; Psort location: CytoplasmicMembrane, score: 10.00. (605 aa)
Your Current Organism:
Bacteroides eggerthii
NCBI taxonomy Id: 483216
Other names: B. eggerthii DSM 20697, Bacteroides eggerthii ATCC 27754, Bacteroides eggerthii DSM 20697, Bacteroides eggerthii str. DSM 20697, Bacteroides eggerthii strain DSM 20697
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