STRINGSTRING
EEC55658.1 EEC55658.1 EEC55406.1 EEC55406.1 EEC54708.1 EEC54708.1 yfiO yfiO EEC53087.1 EEC53087.1 EEC52637.1 EEC52637.1 EEC52786.1 EEC52786.1 EEC52288.1 EEC52288.1 EEC52481.1 EEC52481.1 EEC52209.1 EEC52209.1 ompH ompH yaeT yaeT
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EEC55658.1Hypothetical protein. (525 aa)
EEC55406.1Hypothetical protein; Psort location: OuterMembrane, score: 9.49. (910 aa)
EEC54708.1Tetratricopeptide repeat protein. (227 aa)
yfiOOuter membrane assembly lipoprotein YfiO. (267 aa)
EEC53087.1Outer membrane protein, OMP85 family; Psort location: CytoplasmicMembrane, score: 9.96. (770 aa)
EEC52637.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (73 aa)
EEC52786.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (836 aa)
EEC52288.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00. (1114 aa)
EEC52481.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (193 aa)
EEC52209.1Outer membrane protein. (168 aa)
ompHOuter membrane protein; KEGG: gka:GK3362 0.0094 F0F1-type ATP synthaseB chain K02109. (164 aa)
yaeTOuter membrane protein assembly complex, YaeT protein; KEGG: pfl:PFL_5589 0.0052 rpoB; DNA-directed RNA polymerase, beta subunit K03043; Psort location: OuterMembrane, score: 9.92. (879 aa)
Your Current Organism:
Bacteroides eggerthii
NCBI taxonomy Id: 483216
Other names: B. eggerthii DSM 20697, Bacteroides eggerthii ATCC 27754, Bacteroides eggerthii DSM 20697, Bacteroides eggerthii str. DSM 20697, Bacteroides eggerthii strain DSM 20697
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