STRINGSTRING
gltA gltA purF_1 purF_1 glnA-2 glnA-2 glmS glmS gltB gltB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gltAKEGG: bth:BT4310 0. NADPH-dependent glutamate synthase small chain K00266; Psort location: Cytoplasmic, score: 9.97. (768 aa)
purF_1KEGG: bth:BT4582 1.6e-227 amidophosphoribosyltransferase precursor K00764; Psort location: Cytoplasmic, score: 8.96; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. (469 aa)
glnA-2Glutamate--ammonia ligase, catalytic domain protein; KEGG: bth:BT0785 7.8e-235 glutamine synthetase I K01915; Psort location: Cytoplasmic, score: 9.26. (500 aa)
glmSGlutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (614 aa)
gltBClass II glutamine amidotransferase; KEGG: bth:BT0553 0. glutamate synthase, large subunit K00265; Psort location: OuterMembrane, score: 9.49. (1517 aa)
Your Current Organism:
Bacteroides eggerthii
NCBI taxonomy Id: 483216
Other names: B. eggerthii DSM 20697, Bacteroides eggerthii ATCC 27754, Bacteroides eggerthii DSM 20697, Bacteroides eggerthii str. DSM 20697, Bacteroides eggerthii strain DSM 20697
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