STRINGSTRING
tcyN tcyN EEC53130.1 EEC53130.1 ybbM ybbM EEC53132.1 EEC53132.1 EEC53133.1 EEC53133.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
tcyNKEGG: cjr:CJE1000 1.1e-22 pebC; amino acid ABC transporter, ATP-binding protein PEB1 K02028; Psort location: Cytoplasmic, score: 9.12. (206 aa)
EEC53130.1Hypothetical protein. (92 aa)
ybbMConserved hypothetical protein TIGR00245; Psort location: CytoplasmicMembrane, score: 10.00. (268 aa)
EEC53132.1Dinuclear metal center protein, YbgI family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family. (364 aa)
EEC53133.1Putative zinc ribbon domain protein; KEGG: fnu:FN0522 1.1e-05 exonuclease SBCC K03546; Psort location: Cytoplasmic, score: 8.96. (276 aa)
Your Current Organism:
Bacteroides eggerthii
NCBI taxonomy Id: 483216
Other names: B. eggerthii DSM 20697, Bacteroides eggerthii ATCC 27754, Bacteroides eggerthii DSM 20697, Bacteroides eggerthii str. DSM 20697, Bacteroides eggerthii strain DSM 20697
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