STRINGSTRING
AMA51248.1 AMA51248.1 AMA51249.1 AMA51249.1 AMA51521.1 AMA51521.1 AMA51522.1 AMA51522.1 AMA51523.1 AMA51523.1 AMA51524.1 AMA51524.1 AMA51525.1 AMA51525.1 AMA51628.1 AMA51628.1 AMA51629.1 AMA51629.1 pepF pepF AMA52623.1 AMA52623.1 AMA52624.1 AMA52624.1 desR desR AMA53680.1 AMA53680.1 AMA53681.1 AMA53681.1 AMA53682.1 AMA53682.1 degQ degQ AMA53815.1 AMA53815.1 AMA53816.1 AMA53816.1 AMA53817.1 AMA53817.1 AMA53818.1 AMA53818.1 AMA53819.1 AMA53819.1 AMA53820.1 AMA53820.1 AMA53912.1 AMA53912.1 AMA53913.1 AMA53913.1 AMA53914.1 AMA53914.1 AMA53915.1 AMA53915.1 AMA54045.1 AMA54045.1 AMA54046.1 AMA54046.1 AMA54394.1 AMA54394.1 AMA54395.1 AMA54395.1 AMA54396.1 AMA54396.1 pepT pepT AMA54398.1 AMA54398.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AMA51248.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)
AMA51249.1Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
AMA51521.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)
AMA51522.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
AMA51523.1Antibiotic ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
AMA51524.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (396 aa)
AMA51525.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (384 aa)
AMA51628.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
AMA51629.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
pepFOligopeptidase PepB; Derived by automated computational analysis using gene prediction method: Protein Homology. (670 aa)
AMA52623.1Fatty acid desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)
AMA52624.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)
desRTwo-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (199 aa)
AMA53680.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (765 aa)
AMA53681.1Competence protein ComX; Derived by automated computational analysis using gene prediction method: Protein Homology. (53 aa)
AMA53682.1Isoprenyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
degQDegradation enzyme regulation protein DegQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (46 aa)
AMA53815.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (211 aa)
AMA53816.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
AMA53817.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (241 aa)
AMA53818.1Protein liaG; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
AMA53819.1Protein LiaH; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
AMA53820.1Protein liaI; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)
AMA53912.1Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (200 aa)
AMA53913.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)
AMA53914.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
AMA53915.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
AMA54045.1Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
AMA54046.1Histidine kinase; Member of the two-component regulatory system DegS/DegU, which plays an important role in the transition growth phase. (385 aa)
AMA54394.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
AMA54395.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (406 aa)
AMA54396.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
pepTPeptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family. (410 aa)
AMA54398.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (42 aa)
Your Current Organism:
Bacillus subtilis inaquosorum
NCBI taxonomy Id: 483913
Other names: B. subtilis subsp. inaquosorum, BGSC 3A28, Bacillus subtilis subsp. inaquosorum, Bacillus subtilis subsp. inaquosorum Rooney et al. 2009, DSM 22148, KCTC 13429, NRRL B-23052
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