STRINGSTRING
KWX81448.1 KWX81448.1 KWX81218.1 KWX81218.1 rsmI rsmI yabB yabB KWX81082.1 KWX81082.1 yaaT yaaT KWX81085.1 KWX81085.1 KWX81086.1 KWX81086.1 KWX81089.1 KWX81089.1 KWX81090.1 KWX81090.1 rnjA1 rnjA1 KWX76788.1 KWX76788.1 rny rny rnjA3 rnjA3 KWX70304.1 KWX70304.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KWX81448.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)
KWX81218.1Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
rsmI16S rRNA methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. (300 aa)
yabBHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
KWX81082.1Initiation-control protein; Involved in initiation control of chromosome replication. Belongs to the YabA family. (121 aa)
yaaTStage 0 sporulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
KWX81085.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (147 aa)
KWX81086.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)
KWX81089.1Inhibitor of sigma-G Gin; Derived by automated computational analysis using gene prediction method: Protein Homology. (61 aa)
KWX81090.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (174 aa)
rnjA1Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily. (555 aa)
KWX76788.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1156 aa)
rnyRibonuclease; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. (513 aa)
rnjA3Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily. (559 aa)
KWX70304.1Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)
Your Current Organism:
Paenibacillus riograndensis
NCBI taxonomy Id: 483937
Other names: CECT 7330, P. riograndensis, Paenibacillus riograndensis Beneduzi et al. 2010, Paenibacillus sonchi genomovar Oryzarum, Paenibacillus sonchi genomovar Riograndensis, strain SBR5
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.