STRINGSTRING
KWX81134.1 KWX81134.1 yugH3 yugH3 KWX81120.1 KWX81120.1 KWX81121.1 KWX81121.1 KWX81122.1 KWX81122.1 KWX81123.1 KWX81123.1 KWX80176.1 KWX80176.1 hemA hemA KWX79975.1 KWX79975.1 hemC hemC KWX79977.1 KWX79977.1 hemB hemB hemL2-2 hemL2-2 cobA cobA yvqK yvqK KWX78257.1 KWX78257.1 KWX78258.1 KWX78258.1 cbiM cbiM cbiN cbiN KWX78268.1 KWX78268.1 KWX78315.1 KWX78315.1 KWX78269.1 KWX78269.1 KWX78270.1 KWX78270.1 cbiD cbiD KWX78272.1 KWX78272.1 KWX78316.1 KWX78316.1 cbiF cbiF KWX78274.1 KWX78274.1 cbiA cbiA KWX78014.1 KWX78014.1 KWX77502.1 KWX77502.1 hemG1 hemG1 hemH3 hemH3 hemE hemE hemL1 hemL1 KWX75925.1 KWX75925.1 KWX74350.1 KWX74350.1 KWX74351.1 KWX74351.1 KWX74352.1 KWX74352.1 ecfA ecfA KWX74353.1 KWX74353.1 KWX74354.1 KWX74354.1 KWX73663.1 KWX73663.1 KWX73664.1 KWX73664.1 cobQ cobQ cobS cobS cobU cobU cobT cobT KWX73441.1 KWX73441.1 cbiB cbiB KWX73286.1 KWX73286.1 KWX73062.1 KWX73062.1 KWX72977.1 KWX72977.1 KWX72978.1 KWX72978.1 KWX72979.1 KWX72979.1 KWX72980.1 KWX72980.1 KWX72981.1 KWX72981.1 cbiO cbiO ecfA2-2 ecfA2-2 KWX71715.1 KWX71715.1 hemH1 hemH1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KWX81134.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (69 aa)
yugH3Catalyzes the transamination of the aromatic amino acid forming a ketoacid; first step in aromatic amino acid degradation in lactococci; Derived by automated computational analysis using gene prediction method: Protein Homology. (406 aa)
KWX81120.1AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)
KWX81121.1Coat protein F; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
KWX81122.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (78 aa)
KWX81123.1Amino acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)
KWX80176.1Disulfide bond formation protein DsbA; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
hemAglutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). (463 aa)
KWX79975.1Siroheme synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
hemCPorphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. (316 aa)
KWX79977.1HemD protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (515 aa)
hemBDelta-aminolevulinic acid dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ALAD family. (332 aa)
hemL2-2Glutamate-1-semialdehyde aminotransferase; Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)
cobAuroporphyrin-III methyltransferase; Catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
yvqKCobalamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Cob(I)alamin adenosyltransferase family. (187 aa)
KWX78257.1Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. (345 aa)
KWX78258.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family. (120 aa)
cbiMCobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. (255 aa)
cbiNCobalt transporter; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family. (89 aa)
KWX78268.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
KWX78315.1Cobalt ABC transporter ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (284 aa)
KWX78269.1Precorrin-6x reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
KWX78270.1precorrin-8X methylmutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)
cbiDcobalt-precorrin-6A synthase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. (385 aa)
KWX78272.1Cobalamin biosynthesis protein CbiE; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)
KWX78316.1Precorrin-2 C20-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the precorrin methyltransferase family. (242 aa)
cbiFCobalt-precorrin-4 C(11)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the precorrin methyltransferase family. (267 aa)
KWX78274.1Cobalamin biosynthesis protein CbiG; Derived by automated computational analysis using gene prediction method: Protein Homology. (371 aa)
cbiACobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. (635 aa)
KWX78014.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate mutase family. (205 aa)
KWX77502.1Heme peroxidase; May function as heme-dependent peroxidase. (252 aa)
hemG1Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX. (496 aa)
hemH3Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (318 aa)
hemEUroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. (355 aa)
hemL1Glutamate-1-semialdehyde aminotransferase; Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)
KWX75925.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
KWX74350.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (66 aa)
KWX74351.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (193 aa)
KWX74352.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)
ecfAPolyamine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
KWX74353.1ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
KWX74354.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
KWX73663.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
KWX73664.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)
cobQCobalamin biosynthesis protein CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (537 aa)
cobSCobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. (268 aa)
cobUAdenosylcobinamide-phosphate guanylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)
cobTNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). (354 aa)
KWX73441.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
cbiBCobalamin biosynthesis protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (321 aa)
KWX73286.1Threonine-phosphate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
KWX73062.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1472 aa)
KWX72977.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (80 aa)
KWX72978.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
KWX72979.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
KWX72980.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (560 aa)
KWX72981.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
cbiOWith CbiNQ forms the ABC transporter for cobalt import; Bacillus spp. have two adjacent copies of this gene; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
ecfA2-2ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (297 aa)
KWX71715.1Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa)
hemH1Hypothetical protein; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. (338 aa)
Your Current Organism:
Paenibacillus riograndensis
NCBI taxonomy Id: 483937
Other names: CECT 7330, P. riograndensis, Paenibacillus riograndensis Beneduzi et al. 2010, Paenibacillus sonchi genomovar Oryzarum, Paenibacillus sonchi genomovar Riograndensis, strain SBR5
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