(6 nodes) Adhesin B, and ABC transporter, TroCD-like network (Paenibacillus riograndensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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gene fusions

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Others

textmining

co-expression

protein homology

Your Input:
	KWX76855.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family. (370 aa)
	adcB	Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
	adcC	Zinc ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
	KWX74971.1	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
	KWX74972.1	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
	KWX74973.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family. (326 aa)

Your Current Organism:

Paenibacillus riograndensis

NCBI taxonomy Id: 483937
Other names: CECT 7330, P. riograndensis, Paenibacillus riograndensis Beneduzi et al. 2010, Paenibacillus sonchi genomovar Oryzarum, Paenibacillus sonchi genomovar Riograndensis, strain SBR5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KWX74971.1	KWX74972.1	AMQ84_19110	AMQ84_19115	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
KWX74971.1	KWX74973.1	AMQ84_19110	AMQ84_19120	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	0.988
KWX74971.1	KWX76855.1	AMQ84_19110	AMQ84_14385	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	0.988
KWX74971.1	adcB	AMQ84_19110	AMQ84_14390	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.910
KWX74971.1	adcC	AMQ84_19110	AMQ84_14395	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Zinc ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.989
KWX74972.1	KWX74971.1	AMQ84_19115	AMQ84_19110	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
KWX74972.1	KWX74973.1	AMQ84_19115	AMQ84_19120	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	0.994
KWX74972.1	KWX76855.1	AMQ84_19115	AMQ84_14385	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	0.985
KWX74972.1	adcB	AMQ84_19115	AMQ84_14390	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.993
KWX74972.1	adcC	AMQ84_19115	AMQ84_14395	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Zinc ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.912
KWX74973.1	KWX74971.1	AMQ84_19120	AMQ84_19110	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
KWX74973.1	KWX74972.1	AMQ84_19120	AMQ84_19115	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
KWX74973.1	KWX76855.1	AMQ84_19120	AMQ84_14385	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	0.914
KWX74973.1	adcB	AMQ84_19120	AMQ84_14390	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
KWX74973.1	adcC	AMQ84_19120	AMQ84_14395	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	Zinc ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
KWX76855.1	KWX74971.1	AMQ84_14385	AMQ84_19110	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
KWX76855.1	KWX74972.1	AMQ84_14385	AMQ84_19115	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
KWX76855.1	KWX74973.1	AMQ84_14385	AMQ84_19120	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	0.914
KWX76855.1	adcB	AMQ84_14385	AMQ84_14390	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
KWX76855.1	adcC	AMQ84_14385	AMQ84_14395	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.	Zinc ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996

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