STRINGSTRING
KWX77674.1 KWX77674.1 ytlD ytlD ytlC ytlC ytlA ytlA KWX75298.1 KWX75298.1 KWX75218.1 KWX75218.1 KWX75219.1 KWX75219.1 KWX75220.1 KWX75220.1 KWX74137.1 KWX74137.1 KWX74138.1 KWX74138.1 KWX74139.1 KWX74139.1 cmpC cmpC KWX74141.1 KWX74141.1 KWX74142.1 KWX74142.1 KWX73669.1 KWX73669.1 KWX73670.1 KWX73670.1 KWX73809.1 KWX73809.1 KWX73671.1 KWX73671.1 yhxA yhxA KWX71644.1 KWX71644.1 KWX71646.1 KWX71646.1 KWX71647.1 KWX71647.1 KWX71648.1 KWX71648.1 KWX71695.1 KWX71695.1 KWX71096.1 KWX71096.1 KWX71097.1 KWX71097.1 KWX71098.1 KWX71098.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KWX77674.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)
ytlDABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)
ytlCSpermidine/putrescine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa)
ytlAHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
KWX75298.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
KWX75218.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
KWX75219.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
KWX75220.1FAD/FMN-containing dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (83 aa)
KWX74137.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)
KWX74138.1Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (484 aa)
KWX74139.1Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
cmpCNitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
KWX74141.1Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
KWX74142.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)
KWX73669.1Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
KWX73670.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (269 aa)
KWX73809.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (252 aa)
KWX73671.1Myristoyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
yhxAAminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (455 aa)
KWX71644.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
KWX71646.1Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
KWX71647.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)
KWX71648.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
KWX71695.1FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (184 aa)
KWX71096.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
KWX71097.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
KWX71098.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)
Your Current Organism:
Paenibacillus riograndensis
NCBI taxonomy Id: 483937
Other names: CECT 7330, P. riograndensis, Paenibacillus riograndensis Beneduzi et al. 2010, Paenibacillus sonchi genomovar Oryzarum, Paenibacillus sonchi genomovar Riograndensis, strain SBR5
Server load: low (34%) [HD]