STRINGSTRING
glpX glpX fba fba KWX80761.1 KWX80761.1 ptsI3 ptsI3 KWX80774.1 KWX80774.1 fruA fruA fruK fruK KWX80728.1 KWX80728.1 ptsI1 ptsI1 KWX80678.1 KWX80678.1 ptsG1 ptsG1 glcT glcT glmU glmU KWX80444.1 KWX80444.1 glmS glmS glmM glmM yqjI3 yqjI3 treR treR treP3 treP3 treA treA arbF arbF bglH3 bglH3 eno eno gpmI gpmI tpiA tpiA pgk pgk gap1 gap1 glcK glcK yqeC1 yqeC1 gnuT gnuT gntK gntK KWX78395.1 KWX78395.1 pfkB pfkB fda fda gpmA gpmA KWX77198.1 KWX77198.1 tal2-2 tal2-2 gap5 gap5 pfkA pfkA KWX76346.1 KWX76346.1 mtlA mtlA KWX76429.1 KWX76429.1 KWX76348.1 KWX76348.1 mtlD mtlD zwf5 zwf5 nagA nagA nagB nagB KWX75199.1 KWX75199.1 nanE nanE KWX75250.1 KWX75250.1 KWX74745.1 KWX74745.1 KWX74359.1 KWX74359.1 KWX74360.1 KWX74360.1 KWX74361.1 KWX74361.1 KWX74362.1 KWX74362.1 murQ murQ KWX74052.1 KWX74052.1 licH licH pgcA pgcA pgi pgi tkt tkt KWX73401.1 KWX73401.1 KWX73429.1 KWX73429.1 KWX73008.1 KWX73008.1 ydjF ydjF yqeC3 yqeC3 zwf3 zwf3 zwf1 zwf1 tal2-1 tal2-1 yqjI1 yqjI1 KWX71662.1 KWX71662.1 ptsG3 ptsG3 KWX71001.1 KWX71001.1 KWX71145.1 KWX71145.1 gap3 gap3 ptsI5 ptsI5 KWX69443.1 KWX69443.1 bglH9 bglH9 KWX69446.1 KWX69446.1 KWX69447.1 KWX69447.1 KWX69448.1 KWX69448.1 KWX69449.1 KWX69449.1 KWX69590.1 KWX69590.1 sacY sacY
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
glpXType II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)
fbaFructose-bisphosphate aldolase; Catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; induced by anaerobic conditions in Bacillus subtilis; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
KWX80761.1PTS glucose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology. (628 aa)
ptsI3Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). (588 aa)
KWX80774.1PTS sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (81 aa)
fruAPTS fructose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology. (646 aa)
fruKPhosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. (303 aa)
KWX80728.1DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
ptsI1Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). (570 aa)
KWX80678.1PTS maltose transporter subunit IIBC; Derived by automated computational analysis using gene prediction method: Protein Homology. (91 aa)
ptsG1PTS glucose transporter subunit IICBA; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology. (687 aa)
glcTPtsGHI operon antiterminator; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
glmUGlucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (466 aa)
KWX80444.1ROK family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
glmSGlutamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. (610 aa)
glmMPhosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. (446 aa)
yqjI36-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (470 aa)
treRTranscriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
treP3PTS beta-glucoside transporter subunit IIABC; Derived by automated computational analysis using gene prediction method: Protein Homology. (666 aa)
treATrehalose-6-phosphate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (567 aa)
arbFHypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (62 aa)
bglH36-phospho-beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 1 family. (485 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (428 aa)
gpmIPhosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (514 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (251 aa)
pgkPhosphoglycerate kinase; Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate kinase family. (393 aa)
gap1Glyceraldehyde-3-phosphate dehydrogenase; NAD-dependent; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; active during glycolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (336 aa)
glcKGlucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
yqeC16-phosphogluconate dehydrogenase; Similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; Derived by automated computational analysis using gene prediction method: Protein Homology. (300 aa)
gnuTPermease DsdX; Member of the Gnt family of gluconate transporters; not involved in gluconate transport; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology. (453 aa)
gntKGluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family. (509 aa)
KWX78395.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
pfkBPhosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. (314 aa)
fdaFructose-1,6-bisphosphate aldolase; Catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I fructose-bisphosphate aldolase family. (295 aa)
gpmAPhosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (249 aa)
KWX77198.13-carboxymuconate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)
tal2-2Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. (215 aa)
gap5Glyceraldehyde-3-phosphate dehydrogenase; NAD-dependent; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; active during glycolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (336 aa)
pfkA6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (323 aa)
KWX76346.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (72 aa)
mtlAPTS mannitol transporter subunit IIBC; CmtA with CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system, which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli; cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (487 aa)
KWX76429.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (688 aa)
KWX76348.1PTS mannitol transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)
mtlDMannitol-1-phosphate 5-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)
zwf5Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (516 aa)
nagAN-acetylglucosamine-6-phosphate deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)
nagBGlucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion. (242 aa)
KWX75199.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
nanEN-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P). (239 aa)
KWX75250.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
KWX74745.1Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa)
KWX74359.1PTS glucose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
KWX74360.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
KWX74361.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
KWX74362.1Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (489 aa)
murQN-acetylmuramic acid-6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. (301 aa)
KWX74052.1Phosphoketolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (794 aa)
licHDiacetylchitobiose-6-phosphate hydrolase; Catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa)
pgcAPhosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (572 aa)
pgiGlucose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPI family. (451 aa)
tktTransketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. (682 aa)
KWX73401.1Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)
KWX73429.1Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)
KWX73008.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (643 aa)
ydjFDeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
yqeC36-phosphogluconate dehydrogenase; Similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
zwf3Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (510 aa)
zwf1Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone. (503 aa)
tal2-1Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. (222 aa)
yqjI16-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. (471 aa)
KWX71662.16-phosphogluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
ptsG3PTS sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (483 aa)
KWX71001.1PTS glucose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)
KWX71145.1Transcription antiterminator BglG; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
gap3Glyceraldehyde-3-phosphate dehydrogenase; NAD-dependent; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; active during glycolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (336 aa)
ptsI5Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). (575 aa)
KWX69443.1Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology. (93 aa)
bglH9Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 1 family. (479 aa)
KWX69446.1PTS lactose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology. (115 aa)
KWX69447.1protein-N(pi)-phosphohistidine--sugar phosphotransferase; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. (409 aa)
KWX69448.1PTS lactose transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology. (108 aa)
KWX69449.1Transcription antiterminator BglG; Derived by automated computational analysis using gene prediction method: Protein Homology. (635 aa)
KWX69590.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (484 aa)
sacYLevansucrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)
Your Current Organism:
Paenibacillus riograndensis
NCBI taxonomy Id: 483937
Other names: CECT 7330, P. riograndensis, Paenibacillus riograndensis Beneduzi et al. 2010, Paenibacillus sonchi genomovar Oryzarum, Paenibacillus sonchi genomovar Riograndensis, strain SBR5
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