STRINGSTRING
KWX79758.1 KWX79758.1 lplB5 lplB5 KWX79760.1 KWX79760.1 KWX76440.1 KWX76440.1 KWX76413.1 KWX76413.1 KWX76414.1 KWX76414.1 KWX76225.1 KWX76225.1 yteP9 yteP9 KWX76192.1 KWX76192.1 KWX71704.1 KWX71704.1 lplC1 lplC1 lplB1 lplB1 lplC5 lplC5 KWX71138.1 KWX71138.1 KWX70952.1 KWX70952.1 KWX70254.1 KWX70254.1 KWX70255.1 KWX70255.1 lplB3 lplB3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KWX79758.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (521 aa)
lplB5Protein lplB; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)
KWX79760.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)
KWX76440.1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
KWX76413.1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (301 aa)
KWX76414.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (555 aa)
KWX76225.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (533 aa)
yteP9Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)
KWX76192.1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
KWX71704.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (503 aa)
lplC1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
lplB1Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
lplC5Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
KWX71138.1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (298 aa)
KWX70952.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (555 aa)
KWX70254.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (551 aa)
KWX70255.1Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
lplB3Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
Your Current Organism:
Paenibacillus riograndensis
NCBI taxonomy Id: 483937
Other names: CECT 7330, P. riograndensis, Paenibacillus riograndensis Beneduzi et al. 2010, Paenibacillus sonchi genomovar Oryzarum, Paenibacillus sonchi genomovar Riograndensis, strain SBR5
Server load: medium (44%) [HD]