STRINGSTRING
KWX79801.1 KWX79801.1 KWX79997.1 KWX79997.1 KWX79996.1 KWX79996.1 npr npr ftsH ftsH KWX80627.1 KWX80627.1 KWX80760.1 KWX80760.1 KWX80815.1 KWX80815.1 KWX80805.1 KWX80805.1 KWX80972.1 KWX80972.1 lspA lspA KWX81223.1 KWX81223.1 KWX75681.1 KWX75681.1 gpr5 gpr5 KWX76660.1 KWX76660.1 yjbG yjbG KWX76807.1 KWX76807.1 KWX77379.1 KWX77379.1 KWX77378.1 KWX77378.1 KWX77331.1 KWX77331.1 lytH lytH KWX77539.1 KWX77539.1 KWX77494.1 KWX77494.1 lexA lexA KWX77965.1 KWX77965.1 KWX77954.1 KWX77954.1 KWX78290.1 KWX78290.1 KWX78658.1 KWX78658.1 clpP1 clpP1 clpP2 clpP2 KWX78967.1 KWX78967.1 KWX78960.1 KWX78960.1 KWX79209.1 KWX79209.1 KWX79197.1 KWX79197.1 KWX79346.1 KWX79346.1 KWX79456.1 KWX79456.1 KWX79449.1 KWX79449.1 KWX79781.1 KWX79781.1 aprE aprE KWX69502.1 KWX69502.1 KWX71029.1 KWX71029.1 KWX71572.1 KWX71572.1 KWX72241.1 KWX72241.1 KWX72595.1 KWX72595.1 hslV hslV rasP rasP ymxG ymxG KWX73331.1 KWX73331.1 KWX73767.1 KWX73767.1 KWX73828.1 KWX73828.1 KWX74143.1 KWX74143.1 KWX74724.1 KWX74724.1 KWX74661.1 KWX74661.1 lon lon lon2 lon2 clpP clpP lspA-2 lspA-2 spoIIGA spoIIGA KWX75727.1 KWX75727.1 ybeY ybeY KWX75692.1 KWX75692.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KWX79801.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)
KWX79997.1Zn-dependent protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (280 aa)
KWX79996.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
nprPeptidase M4; Extracellular zinc metalloprotease. (534 aa)
ftsHCell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. (684 aa)
KWX80627.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)
KWX80760.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
KWX80815.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
KWX80805.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)
KWX80972.1Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
lspASignal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. (152 aa)
KWX81223.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
KWX75681.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. (1369 aa)
gpr5Peptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family. (336 aa)
KWX76660.1Signal peptidase I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family. (196 aa)
yjbGOligopeptidase PepB; Derived by automated computational analysis using gene prediction method: Protein Homology. (596 aa)
KWX76807.1Rhomboid family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)
KWX77379.1Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (436 aa)
KWX77378.1Trypsin; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
KWX77331.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
lytHPeptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology. (355 aa)
KWX77539.1Oligoendopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (599 aa)
KWX77494.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (564 aa)
lexAXRE family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (208 aa)
KWX77965.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)
KWX77954.1Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family. (165 aa)
KWX78290.1Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (561 aa)
KWX78658.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (76 aa)
clpP1Clp protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. (198 aa)
clpP2Clp protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. (193 aa)
KWX78967.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. (418 aa)
KWX78960.1Oligoendopeptidase F; Derived by automated computational analysis using gene prediction method: Protein Homology. (563 aa)
KWX79209.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa)
KWX79197.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (590 aa)
KWX79346.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (254 aa)
KWX79456.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (594 aa)
KWX79449.1Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)
KWX79781.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
aprEHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
KWX69502.1Metalloendopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)
KWX71029.1Peptidase S16; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)
KWX71572.1Signal peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa)
KWX72241.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
KWX72595.1Signal peptidase I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family. (206 aa)
hslVATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. (180 aa)
rasPRIP metalloprotease RseP; Derived by automated computational analysis using gene prediction method: Protein Homology. (424 aa)
ymxGZinc protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family. (421 aa)
KWX73331.1Peptidase A24; Derived by automated computational analysis using gene prediction method: Protein Homology. (169 aa)
KWX73767.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
KWX73828.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (196 aa)
KWX74143.1Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0255 family. (380 aa)
KWX74724.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family. (500 aa)
KWX74661.1Abortive infection protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)
lonDNA-binding protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (787 aa)
lon2Lon protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (569 aa)
clpPClp protease; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. (196 aa)
lspA-2Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. (167 aa)
spoIIGAPeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
KWX75727.1Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family. (629 aa)
ybeYMetalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (165 aa)
KWX75692.1Zinc metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology. (230 aa)
Your Current Organism:
Paenibacillus riograndensis
NCBI taxonomy Id: 483937
Other names: CECT 7330, P. riograndensis, Paenibacillus riograndensis Beneduzi et al. 2010, Paenibacillus sonchi genomovar Oryzarum, Paenibacillus sonchi genomovar Riograndensis, strain SBR5
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