STRINGSTRING
KWX80085.1 KWX80085.1 KWX79901.1 KWX79901.1 KWX79601.1 KWX79601.1 KWX79455.1 KWX79455.1 gnuT gnuT metN3 metN3 KWX76159.1 KWX76159.1 metN1-2 metN1-2 kdgT kdgT KWX73664.1 KWX73664.1 KWX73810.1 KWX73810.1 metN1-1 metN1-1 KWX73379.1 KWX73379.1 KWX72957.1 KWX72957.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KWX80085.1Biotin carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (439 aa)
KWX79901.1Citrate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
KWX79601.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)
KWX79455.1ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (599 aa)
gnuTPermease DsdX; Member of the Gnt family of gluconate transporters; not involved in gluconate transport; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology. (453 aa)
metN3Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (338 aa)
KWX76159.1C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (439 aa)
metN1-2Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (347 aa)
kdgT2-keto-3-deoxygluconate permease; The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system. Belongs to the KdgT transporter family. (334 aa)
KWX73664.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (202 aa)
KWX73810.1Amino acid:proton symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. (452 aa)
metN1-1Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (339 aa)
KWX73379.1Gluconate:proton symporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (431 aa)
KWX72957.1Cytochrome C biogenesis protein CcmE; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa)
Your Current Organism:
Paenibacillus riograndensis
NCBI taxonomy Id: 483937
Other names: CECT 7330, P. riograndensis, Paenibacillus riograndensis Beneduzi et al. 2010, Paenibacillus sonchi genomovar Oryzarum, Paenibacillus sonchi genomovar Riograndensis, strain SBR5
Server load: low (18%) [HD]