STRINGSTRING
dnaG dnaG KWX71531.1 KWX71531.1 KWX72154.1 KWX72154.1 KWX72587.1 KWX72587.1 KWX73786.1 KWX73786.1 KWX73694.1 KWX73694.1 KWX74913.1 KWX74913.1 addA addA addB addB KWX77011.1 KWX77011.1 ruvB ruvB ruvA ruvA helD helD recG recG priA priA pcrA pcrA KWX79015.1 KWX79015.1 dnaC dnaC recQ recQ KWX80413.1 KWX80413.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (606 aa)
KWX71531.1DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology. (775 aa)
KWX72154.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1524 aa)
KWX72587.1Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (559 aa)
KWX73786.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (681 aa)
KWX73694.1ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (769 aa)
KWX74913.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
addAATP-dependent helicase; ATP-dependent DNA helicase. (1360 aa)
addBATP-dependent helicase; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily. (1175 aa)
KWX77011.1DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology. (728 aa)
ruvBATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (335 aa)
ruvAATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (207 aa)
helDHelicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (785 aa)
recGATP-dependent DNA helicase; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (683 aa)
priAPrimosomal protein DnaI; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. (843 aa)
pcrAATP-dependent DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology. (781 aa)
KWX79015.1Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (683 aa)
dnaCDNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily. (453 aa)
recQATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (611 aa)
KWX80413.1Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (803 aa)
Your Current Organism:
Paenibacillus riograndensis
NCBI taxonomy Id: 483937
Other names: CECT 7330, P. riograndensis, Paenibacillus riograndensis Beneduzi et al. 2010, Paenibacillus sonchi genomovar Oryzarum, Paenibacillus sonchi genomovar Riograndensis, strain SBR5
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