STRINGSTRING
gtcS gtcS spoIIAB spoIIAB KWX81004.1 KWX81004.1 KWX81006.1 KWX81006.1 KWX80951.1 KWX80951.1 KWX80931.1 KWX80931.1 KWX80923.1 KWX80923.1 KWX80865.1 KWX80865.1 KWX80854.1 KWX80854.1 KWX80799.1 KWX80799.1 KWX80677.1 KWX80677.1 KWX80623.1 KWX80623.1 KWX80502.1 KWX80502.1 vanS vanS KWX80457.1 KWX80457.1 KWX80396.1 KWX80396.1 KWX80291.1 KWX80291.1 KWX80225.1 KWX80225.1 KWX80245.1 KWX80245.1 KWX80094.1 KWX80094.1 KWX79875.1 KWX79875.1 KWX79883.1 KWX79883.1 KWX79892.1 KWX79892.1 KWX79712.1 KWX79712.1 gyrB gyrB gyrB-2 gyrB-2 KWX79444.1 KWX79444.1 KWX79293.1 KWX79293.1 KWX79331.1 KWX79331.1 KWX79221.1 KWX79221.1 ycbM ycbM KWX78984.1 KWX78984.1 nreB nreB KWX78568.1 KWX78568.1 KWX78443.1 KWX78443.1 KWX78288.1 KWX78288.1 KWX78292.1 KWX78292.1 KWX78147.1 KWX78147.1 KWX78162.1 KWX78162.1 KWX78008.1 KWX78008.1 KWX77810.1 KWX77810.1 KWX77826.1 KWX77826.1 barA barA KWX77830.1 KWX77830.1 KWX77694.1 KWX77694.1 KWX77369.1 KWX77369.1 KWX77177.1 KWX77177.1 KWX77184.1 KWX77184.1 KWX76970.1 KWX76970.1 KWX76980.1 KWX76980.1 KWX76779.1 KWX76779.1 KWX76839.1 KWX76839.1 KWX76864.1 KWX76864.1 KWX76583.1 KWX76583.1 KWX76661.1 KWX76661.1 KWX76610.1 KWX76610.1 KWX76336.1 KWX76336.1 KWX76436.1 KWX76436.1 KWX76396.1 KWX76396.1 KWX76145.1 KWX76145.1 KWX76170.1 KWX76170.1 KWX76229.1 KWX76229.1 KWX75929.1 KWX75929.1 bceS bceS KWX75512.1 KWX75512.1 liaS liaS KWX74979.1 KWX74979.1 yxdK yxdK KWX74651.1 KWX74651.1 KWX74401.1 KWX74401.1 KWX74415.1 KWX74415.1 KWX74046.1 KWX74046.1 KWX74050.1 KWX74050.1 KWX74134.1 KWX74134.1 KWX73734.1 KWX73734.1 KWX73737.1 KWX73737.1 degS degS KWX73448.1 KWX73448.1 KWX73432.1 KWX73432.1 KWX72906.1 KWX72906.1 KWX72946.1 KWX72946.1 KWX73004.1 KWX73004.1 KWX73070.1 KWX73070.1 KWX73010.1 KWX73010.1 KWX72470.1 KWX72470.1 htpG htpG KWX72555.1 KWX72555.1 KWX72616.1 KWX72616.1 KWX72105.1 KWX72105.1 KWX72115.1 KWX72115.1 resE resE KWX72126.1 KWX72126.1 KWX72189.1 KWX72189.1 KWX72199.1 KWX72199.1 KWX72248.1 KWX72248.1 KWX71742.1 KWX71742.1 ypdA1 ypdA1 yvfT yvfT KWX71755.1 KWX71755.1 KWX71653.1 KWX71653.1 KWX71667.1 KWX71667.1 KWX71764.1 KWX71764.1 KWX71725.1 KWX71725.1 KWX70910.1 KWX70910.1 KWX70923.1 KWX70923.1 KWX70928.1 KWX70928.1 KWX70935.1 KWX70935.1 KWX71146.1 KWX71146.1 KWX71073.1 KWX71073.1 KWX71121.1 KWX71121.1 KWX70242.1 KWX70242.1 KWX70246.1 KWX70246.1 KWX70330.1 KWX70330.1 KWX69319.1 KWX69319.1 KWX69329.1 KWX69329.1 KWX69573.1 KWX69573.1 KWX69367.1 KWX69367.1 KWX69371.1 KWX69371.1 KWX69425.1 KWX69425.1 KWX69427.1 KWX69427.1 KWX69463.1 KWX69463.1 KWX69497.1 KWX69497.1 KWX69500.1 KWX69500.1 KWX69512.1 KWX69512.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gtcSHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
spoIIABAnti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. (151 aa)
KWX81004.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1040 aa)
KWX81006.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (123 aa)
KWX80951.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (605 aa)
KWX80931.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
KWX80923.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (464 aa)
KWX80865.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (602 aa)
KWX80854.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (611 aa)
KWX80799.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (771 aa)
KWX80677.1Histidine kinase; C4-dicarboxylate-sensing histidine kinase; part of two-component regulatory system with DcuR; regulates anaerobic fumarate respiration; Derived by automated computational analysis using gene prediction method: Protein Homology. (516 aa)
KWX80623.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (662 aa)
KWX80502.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (481 aa)
vanSHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)
KWX80457.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (624 aa)
KWX80396.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)
KWX80291.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)
KWX80225.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (611 aa)
KWX80245.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
KWX80094.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (472 aa)
KWX79875.1Sensor with HAMP domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (578 aa)
KWX79883.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (621 aa)
KWX79892.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (599 aa)
KWX79712.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (585 aa)
gyrBDNA gyrase subunit B; Negatively supercoils closed circular double-stranded DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. (660 aa)
gyrB-2DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner. (636 aa)
KWX79444.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (610 aa)
KWX79293.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (373 aa)
KWX79331.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)
KWX79221.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (623 aa)
ycbMHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (311 aa)
KWX78984.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (483 aa)
nreBHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (356 aa)
KWX78568.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)
KWX78443.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa)
KWX78288.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)
KWX78292.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (482 aa)
KWX78147.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (597 aa)
KWX78162.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (484 aa)
KWX78008.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)
KWX77810.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (594 aa)
KWX77826.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1222 aa)
barAHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (556 aa)
KWX77830.1Serine/threonine protein kinase; Binds to sigma-B preventing the formation of an RNA polymerase holoenzyme; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)
KWX77694.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)
KWX77369.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)
KWX77177.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (598 aa)
KWX77184.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (620 aa)
KWX76970.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (899 aa)
KWX76980.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
KWX76779.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (614 aa)
KWX76839.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (368 aa)
KWX76864.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1157 aa)
KWX76583.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (569 aa)
KWX76661.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (579 aa)
KWX76610.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)
KWX76336.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (585 aa)
KWX76436.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (609 aa)
KWX76396.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (579 aa)
KWX76145.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (595 aa)
KWX76170.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)
KWX76229.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (573 aa)
KWX75929.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa)
bceSHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
KWX75512.1Helicase Ski2; Derived by automated computational analysis using gene prediction method: Protein Homology. (603 aa)
liaSHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)
KWX74979.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (620 aa)
yxdKHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
KWX74651.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa)
KWX74401.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (602 aa)
KWX74415.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (581 aa)
KWX74046.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1032 aa)
KWX74050.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (587 aa)
KWX74134.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (487 aa)
KWX73734.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (600 aa)
KWX73737.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)
degSHistidine kinase; Member of the two-component regulatory system DegS/DegU, which plays an important role in the transition growth phase. (385 aa)
KWX73448.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)
KWX73432.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
KWX72906.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (605 aa)
KWX72946.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (472 aa)
KWX73004.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (627 aa)
KWX73070.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (632 aa)
KWX73010.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (548 aa)
KWX72470.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)
htpGChaperone protein HtpG; Molecular chaperone. Has ATPase activity. (626 aa)
KWX72555.1Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology. (687 aa)
KWX72616.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa)
KWX72105.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)
KWX72115.1Molecular chaperone Hsp90; Derived by automated computational analysis using gene prediction method: Protein Homology. (612 aa)
resEHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)
KWX72126.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (449 aa)
KWX72189.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
KWX72199.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa)
KWX72248.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (608 aa)
KWX71742.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1038 aa)
ypdA1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (547 aa)
yvfTHistidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
KWX71755.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (561 aa)
KWX71653.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (476 aa)
KWX71667.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)
KWX71764.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (631 aa)
KWX71725.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (465 aa)
KWX70910.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (629 aa)
KWX70923.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (359 aa)
KWX70928.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (572 aa)
KWX70935.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (458 aa)
KWX71146.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (891 aa)
KWX71073.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (447 aa)
KWX71121.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (574 aa)
KWX70242.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (594 aa)
KWX70246.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (590 aa)
KWX70330.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (367 aa)
KWX69319.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
KWX69329.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (579 aa)
KWX69573.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (598 aa)
KWX69367.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1025 aa)
KWX69371.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (391 aa)
KWX69425.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)
KWX69427.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)
KWX69463.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (412 aa)
KWX69497.1Response regulator receiver protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (601 aa)
KWX69500.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (585 aa)
KWX69512.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
Your Current Organism:
Paenibacillus riograndensis
NCBI taxonomy Id: 483937
Other names: CECT 7330, P. riograndensis, Paenibacillus riograndensis Beneduzi et al. 2010, Paenibacillus sonchi genomovar Oryzarum, Paenibacillus sonchi genomovar Riograndensis, strain SBR5
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