STRINGSTRING
glpX glpX fba fba adhA adhA KWX80761.1 KWX80761.1 acsA acsA ptsG1 ptsG1 KWX80444.1 KWX80444.1 pdhD1 pdhD1 bglH3 bglH3 eno eno gpmI gpmI tpiA tpiA pgk pgk gap1 gap1 glcK glcK ldh7 ldh7 KWX78408.1 KWX78408.1 pfkB pfkB pyk pyk fda fda KWX78169.1 KWX78169.1 pdhD3 pdhD3 KWX77631.1 KWX77631.1 pdhB pdhB pdhA pdhA KWX77709.1 KWX77709.1 KWX77710.1 KWX77710.1 gpmA gpmA KWX77536.1 KWX77536.1 KWX77182.1 KWX77182.1 gap5 gap5 pfkA pfkA KWX75250.1 KWX75250.1 bfmBC bfmBC ADH2 ADH2 KWX74745.1 KWX74745.1 LPD1 LPD1 acoC acoC KWX74359.1 KWX74359.1 licH licH pgcA pgcA pgi pgi KWX73401.1 KWX73401.1 KWX73429.1 KWX73429.1 yiaY yiaY ytcI ytcI ldh ldh KWX71001.1 KWX71001.1 ywdH ywdH gap3 gap3 bglH9 bglH9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
glpXType II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; Derived by automated computational analysis using gene prediction method: Protein Homology. (331 aa)
fbaFructose-bisphosphate aldolase; Catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; induced by anaerobic conditions in Bacillus subtilis; Derived by automated computational analysis using gene prediction method: Protein Homology. (284 aa)
adhAAlcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
KWX80761.1PTS glucose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology. (628 aa)
acsAacetyl-CoA synthetase; Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (574 aa)
ptsG1PTS glucose transporter subunit IICBA; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology. (687 aa)
KWX80444.1ROK family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)
pdhD1Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; Derived by automated computational analysis using gene prediction method: Protein Homology. (464 aa)
bglH36-phospho-beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 1 family. (485 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (428 aa)
gpmIPhosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (514 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (251 aa)
pgkPhosphoglycerate kinase; Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate kinase family. (393 aa)
gap1Glyceraldehyde-3-phosphate dehydrogenase; NAD-dependent; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; active during glycolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (336 aa)
glcKGlucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
ldh7Lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. (308 aa)
KWX78408.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)
pfkBPhosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. (314 aa)
pykPyruvate kinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)
fdaFructose-1,6-bisphosphate aldolase; Catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate in glycolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I fructose-bisphosphate aldolase family. (295 aa)
KWX78169.1Pyruvate kinase; Catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)
pdhD3Dihydrolipoamide dehydrogenase; E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; Derived by automated computational analysis using gene prediction method: Protein Homology. (470 aa)
KWX77631.1Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (546 aa)
pdhB2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
pdhAPyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). (355 aa)
KWX77709.1Pyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (768 aa)
KWX77710.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)
gpmAPhosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (249 aa)
KWX77536.1Galactose mutarotase; Derived by automated computational analysis using gene prediction method: Protein Homology. (324 aa)
KWX77182.1Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)
gap5Glyceraldehyde-3-phosphate dehydrogenase; NAD-dependent; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; active during glycolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (336 aa)
pfkA6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (323 aa)
KWX75250.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)
bfmBCDihydrolipoamide dehydrogenase; E3 component of the branched-chain alpha-keto acid dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa)
ADH2Acetaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. (873 aa)
KWX74745.1Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (195 aa)
LPD1Dihydrolipoamide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (462 aa)
acoCHypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (446 aa)
KWX74359.1PTS glucose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
licHDiacetylchitobiose-6-phosphate hydrolase; Catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology. (444 aa)
pgcAPhosphoglucomutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (572 aa)
pgiGlucose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPI family. (451 aa)
KWX73401.1Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)
KWX73429.1Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)
yiaY1,2-propanediol oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
ytcIacyl--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (513 aa)
ldhLactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. (317 aa)
KWX71001.1PTS glucose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)
ywdHAldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. (463 aa)
gap3Glyceraldehyde-3-phosphate dehydrogenase; NAD-dependent; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; active during glycolysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (336 aa)
bglH9Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 1 family. (479 aa)
Your Current Organism:
Paenibacillus riograndensis
NCBI taxonomy Id: 483937
Other names: CECT 7330, P. riograndensis, Paenibacillus riograndensis Beneduzi et al. 2010, Paenibacillus sonchi genomovar Oryzarum, Paenibacillus sonchi genomovar Riograndensis, strain SBR5
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