17 items (Paenibacillus riograndensis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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gene fusions

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textmining

co-expression

protein homology

Your Input:
	mqnD	1,4-dihydroxy-6-naphthoate synthase; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily. (279 aa)
	mqnB	Hypothetical protein; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2). (230 aa)
	KWX78974.1	3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UbiD family. (617 aa)
	KWX78310.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (231 aa)
	mqnC	Dehypoxanthine futalosine cyclase; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2). (378 aa)
	mqnE	Dehypoxanthine futalosine cyclase; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate. (368 aa)
	ubiE	Ubiquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2). (250 aa)
	KWX74684.1	Prenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UbiA prenyltransferase family. (291 aa)
	ubiX	Aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (200 aa)
	mqnA	ABC transporter substrate-binding protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). (286 aa)
	KWX73686.1	1,4-dihydroxy-2-naphthoate prenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)
	KWX72118.1	NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (319 aa)
	KWX71718.1	Prenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UbiA prenyltransferase family. (293 aa)
	KWX70937.1	NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
	KWX69405.1	NmrA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)
	KWX69407.1	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)
	KWX69475.1	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (192 aa)

Your Current Organism:

Paenibacillus riograndensis

NCBI taxonomy Id: 483937
Other names: CECT 7330, P. riograndensis, Paenibacillus riograndensis Beneduzi et al. 2010, Paenibacillus sonchi genomovar Oryzarum, Paenibacillus sonchi genomovar Riograndensis, strain SBR5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KWX69405.1	KWX69407.1	AMQ84_30910	AMQ84_30920	NmrA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
KWX69405.1	KWX69475.1	AMQ84_30910	AMQ84_31340	NmrA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
KWX69405.1	KWX70937.1	AMQ84_30910	AMQ84_28285	NmrA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
KWX69405.1	KWX72118.1	AMQ84_30910	AMQ84_25870	NmrA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.920
KWX69405.1	KWX78310.1	AMQ84_30910	AMQ84_09915	NmrA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
KWX69405.1	ubiE	AMQ84_30910	AMQ84_19930	NmrA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ubiquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).	0.900
KWX69407.1	KWX69405.1	AMQ84_30920	AMQ84_30910	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NmrA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
KWX69407.1	KWX69475.1	AMQ84_30920	AMQ84_31340	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
KWX69407.1	KWX70937.1	AMQ84_30920	AMQ84_28285	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
KWX69407.1	KWX72118.1	AMQ84_30920	AMQ84_25870	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
KWX69407.1	KWX78310.1	AMQ84_30920	AMQ84_09915	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
KWX69407.1	ubiE	AMQ84_30920	AMQ84_19930	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ubiquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).	0.900
KWX69475.1	KWX69405.1	AMQ84_31340	AMQ84_30910	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NmrA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
KWX69475.1	KWX69407.1	AMQ84_31340	AMQ84_30920	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
KWX69475.1	KWX70937.1	AMQ84_31340	AMQ84_28285	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
KWX69475.1	KWX72118.1	AMQ84_31340	AMQ84_25870	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903
KWX69475.1	KWX78310.1	AMQ84_31340	AMQ84_09915	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
KWX69475.1	ubiE	AMQ84_31340	AMQ84_19930	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ubiquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).	0.900
KWX70937.1	KWX69405.1	AMQ84_28285	AMQ84_30910	NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	NmrA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
KWX70937.1	KWX69407.1	AMQ84_28285	AMQ84_30920	NmrA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.903

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