(41 nodes) Binding-protein-dependent transport system inner membrane component network (Thermosipho africanus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	THA_1933	Sugar ABC transporter permease. (290 aa)
	THA_1932	Sugar ABC transporter permease, putative. (294 aa)
	THA_1824	Sugar ABC transporter, permease protein. (718 aa)
	THA_1823	Sugar ABC transporter, permease protein. (429 aa)
	THA_1576	Lactose transport system. (270 aa)
	THA_1575	Lactose transport system. (297 aa)
	THA_1533	Oligopeptide ABC transporter, permease protein. (542 aa)
	THA_1532	Oligopeptide transport system permease protein AppB. (321 aa)
	THA_1396	Binding-protein-dependent transport systems inner membrane component. (477 aa)
	THA_1399	Spermidine/putrescine ABC transporter, permease protein. (256 aa)
	THA_846	Maltose transport system permease protein MalG. (279 aa)
	THA_845	Maltose transport system permease protein MalF. (293 aa)
	THA_771	ABC-type dipeptide/oligopeptide/nickel transport systems, permease component. (280 aa)
	THA_770	ABC-type dipeptide/oligopeptide/nickel transport systems, permease component. (329 aa)
	THA_941	ABC transporter, carbohydrate uptake transporter-1 (CUT1) family, permease protein. (270 aa)
	THA_689	Maltose transport system permease protein MalG. (803 aa)
	THA_688	Maltose transport system permease protein MalF. (568 aa)
	THA_68	ABC transporter, permease protein. (418 aa)
	THA_616	Sn-glycerol-3-phosphate transport system permease protein UgpA. (288 aa)
	THA_615	Glycerol-3-phosphate ABC transporter permease protein. (277 aa)
	THA_400	ABC transporter, permease protein. (440 aa)
	THA_33	Oligopeptide transport system permease protein AppB. (345 aa)
	THA_940	ABC transporter. (306 aa)
	THA_1019	Oligopeptide ABC transporter, permease protein. (290 aa)
	THA_1020	Oligopeptide ABC transporter, permease protein. (335 aa)
	THA_1061	Inner membrane protein. (295 aa)
	THA_1062	Sugar ABC transporter permease. (394 aa)
	cysT	W family. (243 aa)
	pstA	Phosphate ABC transporter, permease protein PstA. (273 aa)
	THA_123	Phosphate ABC transporter, permease protein. (286 aa)
	THA_1400	Spermidine/putrescine ABC transporter, permease protein. (271 aa)
	THA_1293	Sugar ABC transporter permease. (272 aa)
	THA_1294	Inner membrane protein. (293 aa)
	THA_1395	Dipeptide ABC transporter, permease protein. (842 aa)
	THA_32	Oligopeptide transport system permease protein AppC. (304 aa)
	THA_1987	Sugar abc transporter, permease protein. (426 aa)
	THA_1986	Sugar transport membrane protein. (289 aa)
	THA_1968	Sugar ABC transporter, permease protein. (276 aa)
	THA_1967	Inner membrane protein. (292 aa)
	THA_1937	Putative transport protein. (300 aa)
	THA_1936	Inner membrane protein. (283 aa)

Your Current Organism:

Thermosipho africanus

NCBI taxonomy Id: 484019
Other names: T. africanus TCF52B, Thermosipho africanus TCF52B, Thermosipho africanus str. TCF52B, Thermosipho africanus strain TCF52B

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
THA_1019	THA_1020	THA_1019	THA_1020	Oligopeptide ABC transporter, permease protein.	Oligopeptide ABC transporter, permease protein.	0.971
THA_1019	THA_1396	THA_1019	THA_1396	Oligopeptide ABC transporter, permease protein.	Binding-protein-dependent transport systems inner membrane component.	0.858
THA_1019	THA_1532	THA_1019	THA_1532	Oligopeptide ABC transporter, permease protein.	Oligopeptide transport system permease protein AppB.	0.891
THA_1019	THA_33	THA_1019	THA_33	Oligopeptide ABC transporter, permease protein.	Oligopeptide transport system permease protein AppB.	0.878
THA_1019	THA_770	THA_1019	THA_770	Oligopeptide ABC transporter, permease protein.	ABC-type dipeptide/oligopeptide/nickel transport systems, permease component.	0.855
THA_1020	THA_1019	THA_1020	THA_1019	Oligopeptide ABC transporter, permease protein.	Oligopeptide ABC transporter, permease protein.	0.971
THA_1020	THA_1395	THA_1020	THA_1395	Oligopeptide ABC transporter, permease protein.	Dipeptide ABC transporter, permease protein.	0.829
THA_1020	THA_1533	THA_1020	THA_1533	Oligopeptide ABC transporter, permease protein.	Oligopeptide ABC transporter, permease protein.	0.865
THA_1020	THA_32	THA_1020	THA_32	Oligopeptide ABC transporter, permease protein.	Oligopeptide transport system permease protein AppC.	0.867
THA_1020	THA_771	THA_1020	THA_771	Oligopeptide ABC transporter, permease protein.	ABC-type dipeptide/oligopeptide/nickel transport systems, permease component.	0.870
THA_1061	THA_1062	THA_1061	THA_1062	Inner membrane protein.	Sugar ABC transporter permease.	0.970
THA_1061	THA_1293	THA_1061	THA_1293	Inner membrane protein.	Sugar ABC transporter permease.	0.866
THA_1061	THA_1576	THA_1061	THA_1576	Inner membrane protein.	Lactose transport system.	0.861
THA_1061	THA_1824	THA_1061	THA_1824	Inner membrane protein.	Sugar ABC transporter, permease protein.	0.866
THA_1061	THA_1933	THA_1061	THA_1933	Inner membrane protein.	Sugar ABC transporter permease.	0.852
THA_1061	THA_1937	THA_1061	THA_1937	Inner membrane protein.	Putative transport protein.	0.861
THA_1061	THA_1968	THA_1061	THA_1968	Inner membrane protein.	Sugar ABC transporter, permease protein.	0.866
THA_1061	THA_1987	THA_1061	THA_1987	Inner membrane protein.	Sugar abc transporter, permease protein.	0.748
THA_1061	THA_400	THA_1061	THA_400	Inner membrane protein.	ABC transporter, permease protein.	0.821
THA_1061	THA_615	THA_1061	THA_615	Inner membrane protein.	Glycerol-3-phosphate ABC transporter permease protein.	0.866