6 items (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJR23425.1	S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde. (285 aa)
	AJR23426.1	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (370 aa)
	AJR23740.1	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (580 aa)
	AJR24192.1	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (475 aa)
	AJR26447.1	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
	AJR25037.1	Zinc-binding dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (351 aa)

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23425.1	AJR23426.1	TZ53_06480	TZ53_06485	S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	0.999
AJR23426.1	AJR23425.1	TZ53_06485	TZ53_06480	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.	0.999
AJR23426.1	AJR23740.1	TZ53_06485	TZ53_08425	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.907
AJR23426.1	AJR24192.1	TZ53_06485	TZ53_11105	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.927
AJR23426.1	AJR25037.1	TZ53_06485	TZ53_16210	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	Zinc-binding dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.954
AJR23426.1	AJR26447.1	TZ53_06485	TZ53_16075	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.958
AJR23740.1	AJR23426.1	TZ53_08425	TZ53_06485	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	0.907
AJR23740.1	AJR24192.1	TZ53_08425	TZ53_11105	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
AJR23740.1	AJR25037.1	TZ53_08425	TZ53_16210	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Zinc-binding dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
AJR23740.1	AJR26447.1	TZ53_08425	TZ53_16075	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
AJR24192.1	AJR23426.1	TZ53_11105	TZ53_06485	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	0.927
AJR24192.1	AJR23740.1	TZ53_11105	TZ53_08425	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.902
AJR24192.1	AJR25037.1	TZ53_11105	TZ53_16210	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Zinc-binding dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
AJR24192.1	AJR26447.1	TZ53_11105	TZ53_16075	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
AJR25037.1	AJR23426.1	TZ53_16210	TZ53_06485	Zinc-binding dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	0.954
AJR25037.1	AJR23740.1	TZ53_16210	TZ53_08425	Zinc-binding dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908
AJR25037.1	AJR24192.1	TZ53_16210	TZ53_11105	Zinc-binding dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.913
AJR25037.1	AJR26447.1	TZ53_16210	TZ53_16075	Zinc-binding dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.920
AJR26447.1	AJR23426.1	TZ53_16075	TZ53_06485	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.	0.958
AJR26447.1	AJR23740.1	TZ53_16075	TZ53_08425	Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.908