STRINGSTRING
AJR22939.1 AJR22939.1 AJR22940.1 AJR22940.1 AJR22941.1 AJR22941.1 sufC sufC AJR22945.1 AJR22945.1 AJR25715.1 AJR25715.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJR22939.1FeS assembly SUF system protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)
AJR22940.1Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (406 aa)
AJR22941.1Fe-S cluster assembly protein SufD; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)
sufCCysteine desulfurase; Part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
AJR22945.1Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology. (494 aa)
AJR25715.1Nitrogen-fixing protein NifU; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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