Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AJR23024.1 | AJR23127.1 | TZ53_03800 | TZ53_04450 | Outer membrane lipoprotein OmlA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.790 |
| AJR23024.1 | AJR24771.1 | TZ53_03800 | TZ53_14600 | Outer membrane lipoprotein OmlA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Pyrrolo-quinoline quinone; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.862 |
| AJR23024.1 | bamA | TZ53_03800 | TZ53_14985 | Outer membrane lipoprotein OmlA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.908 |
| AJR23024.1 | bamD | TZ53_03800 | TZ53_15975 | Outer membrane lipoprotein OmlA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transporter; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.872 |
| AJR23127.1 | AJR23024.1 | TZ53_04450 | TZ53_03800 | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane lipoprotein OmlA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.790 |
| AJR23127.1 | AJR24771.1 | TZ53_04450 | TZ53_14600 | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Pyrrolo-quinoline quinone; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.538 |
| AJR23127.1 | AJR25547.1 | TZ53_04450 | TZ53_19225 | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.904 |
| AJR23127.1 | bamA | TZ53_04450 | TZ53_14985 | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.746 |
| AJR23127.1 | bamD | TZ53_04450 | TZ53_15975 | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Transporter; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.530 |
| AJR23127.1 | lolD | TZ53_04450 | TZ53_19220 | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. | 0.828 |
| AJR24771.1 | AJR23024.1 | TZ53_14600 | TZ53_03800 | Pyrrolo-quinoline quinone; Derived by automated computational analysis using gene prediction method: Protein Homology. | Outer membrane lipoprotein OmlA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.862 |
| AJR24771.1 | AJR23127.1 | TZ53_14600 | TZ53_04450 | Pyrrolo-quinoline quinone; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.538 |
| AJR24771.1 | bamA | TZ53_14600 | TZ53_14985 | Pyrrolo-quinoline quinone; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.979 |
| AJR24771.1 | bamD | TZ53_14600 | TZ53_15975 | Pyrrolo-quinoline quinone; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transporter; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.934 |
| AJR25547.1 | AJR23127.1 | TZ53_19225 | TZ53_04450 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.904 |
| AJR25547.1 | bamA | TZ53_19225 | TZ53_14985 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.817 |
| AJR25547.1 | bamD | TZ53_19225 | TZ53_15975 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transporter; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.585 |
| AJR25547.1 | lolD | TZ53_19225 | TZ53_19220 | ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. | 0.998 |
| bamA | AJR23024.1 | TZ53_14985 | TZ53_03800 | Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Outer membrane lipoprotein OmlA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.908 |
| bamA | AJR23127.1 | TZ53_14985 | TZ53_04450 | Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.746 |
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