STRINGSTRING
AJR24780.1 AJR24780.1 AJR24796.1 AJR24796.1 AJR24797.1 AJR24797.1 AJR24798.1 AJR24798.1 AJR24799.1 AJR24799.1 AJR24800.1 AJR24800.1 AJR26411.1 AJR26411.1 AJR26412.1 AJR26412.1 AJR24846.1 AJR24846.1 AJR25041.1 AJR25041.1 AJR25042.1 AJR25042.1 AJR25043.1 AJR25043.1 AJR25044.1 AJR25044.1 AJR25045.1 AJR25045.1 AJR25046.1 AJR25046.1 AJR25047.1 AJR25047.1 AJR25048.1 AJR25048.1 AJR25049.1 AJR25049.1 AJR25050.1 AJR25050.1 AJR25051.1 AJR25051.1 AJR25054.1 AJR25054.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJR24780.1Flagellar protein FlaI; Derived by automated computational analysis using gene prediction method: Protein Homology. (508 aa)
AJR24796.1Pilus assembly protein TadC; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
AJR24797.1Pilus assembly protein TadB; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
AJR24798.1Pilus assembly protein CpaE; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
AJR24799.1Pilus assembly protein CpaD; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
AJR24800.1Secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family. (509 aa)
AJR26411.1Pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)
AJR26412.1Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
AJR24846.1Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (54 aa)
AJR25041.1Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (59 aa)
AJR25042.1Pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)
AJR25043.1Pilus assembly protein CpaC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family. (493 aa)
AJR25044.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (93 aa)
AJR25045.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (525 aa)
AJR25046.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (175 aa)
AJR25047.1Pilus assembly protein TadE; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)
AJR25048.1Pilus assembly protein CpaE; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)
AJR25049.1Type II secretion system protein E; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)
AJR25050.1Secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
AJR25051.1Secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)
AJR25054.1Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (174 aa)
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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