STRINGSTRING
AJR23460.1 AJR23460.1 AJR23461.1 AJR23461.1 AJR23462.1 AJR23462.1 AJR23463.1 AJR23463.1 AJR26230.1 AJR26230.1 AJR23464.1 AJR23464.1 cobH cobH AJR23466.1 AJR23466.1 AJR23467.1 AJR23467.1 AJR23468.1 AJR23468.1 AJR23469.1 AJR23469.1 AJR23470.1 AJR23470.1 AJR23471.1 AJR23471.1 cbiA cbiA AJR23473.1 AJR23473.1 AJR23483.1 AJR23483.1 cobD cobD AJR23485.1 AJR23485.1 cobS cobS AJR23487.1 AJR23487.1 cobT cobT AJR23489.1 AJR23489.1 AJR24006.1 AJR24006.1 AJR24009.1 AJR24009.1 AJR24503.1 AJR24503.1 cobQ cobQ AJR25951.1 AJR25951.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJR23460.1Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family. (363 aa)
AJR23461.1Cobalamin biosynthesis protein CobW; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)
AJR23462.1Cobalamin biosynthesis protein CobN; Derived by automated computational analysis using gene prediction method: Protein Homology. (1259 aa)
AJR23463.1Cobinamide adenolsyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids. (201 aa)
AJR26230.1cob(II)yrinic acid a,c-diamide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa)
AJR23464.1Cobalamin biosynthesis protein CobG; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
cobHCatalyzes the interconversion of precorrin-8X and hydrogenobyrinate; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)
AJR23466.1Catalyzes the formation of precorrin-3 from precorrin-2; Derived by automated computational analysis using gene prediction method: Protein Homology. (239 aa)
AJR23467.1Catalyzes the formation of precorrin-4 from precorrin-3B and S-adenosyl-L-methionine; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
AJR23468.1cobalt-precorrin-6X reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
AJR23469.1precorrin-6Y methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)
AJR23470.1Precorrin methylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (121 aa)
AJR23471.1Precorrin-4 C11-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the precorrin methyltransferase family. (260 aa)
cbiACobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. (439 aa)
AJR23473.1Precorrin 6A synthase; Catalyzes the methylation of C-1 in precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A. (251 aa)
AJR23483.1Cobalamin biosynthesis protein; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate. (167 aa)
cobDAdenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (311 aa)
AJR23485.1Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
cobSCobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. (236 aa)
AJR23487.1Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (187 aa)
cobTNicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB). (338 aa)
AJR23489.1Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (135 aa)
AJR24006.1Cobalt chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (608 aa)
AJR24009.1Cobalamin biosynthesis protein CobS; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
AJR24503.1cob(I)yrinic acid a c-diamide adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Cob(I)alamin adenosyltransferase family. (189 aa)
cobQCobalamin biosynthesis protein CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (483 aa)
AJR25951.1Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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