STRINGSTRING
AJR23153.1 AJR23153.1 AJR23185.1 AJR23185.1 AJR25200.1 AJR25200.1 AJR25201.1 AJR25201.1 AJR25202.1 AJR25202.1 AJR25203.1 AJR25203.1 AJR25529.1 AJR25529.1 AJR26505.1 AJR26505.1 AJR25530.1 AJR25530.1 AJR25531.1 AJR25531.1 AJR26506.1 AJR26506.1 AJR25533.1 AJR25533.1 AJR25534.1 AJR25534.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJR23153.1Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
AJR23185.1Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (803 aa)
AJR25200.1N-carbamoylputrescine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (282 aa)
AJR25201.1Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (117 aa)
AJR25202.1Agmatine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the agmatine deiminase family. (327 aa)
AJR25203.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (77 aa)
AJR25529.1Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
AJR26505.1S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa)
AJR25530.1Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (330 aa)
AJR25531.1ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. (527 aa)
AJR26506.1Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (401 aa)
AJR25533.1Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily. (390 aa)
AJR25534.1Decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (397 aa)
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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