10 items (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJR22411.1	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (941 aa)
	AJR23646.1	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (908 aa)
	AJR23950.1	Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (514 aa)
	AJR23951.1	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (962 aa)
	AJR26298.1	SapC-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)
	AJR23952.1	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)
	AJR23983.1	Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (517 aa)
	AJR25928.1	Signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (927 aa)
	AJR25929.1	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
	AJR26559.1	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (496 aa)

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22411.1	AJR23950.1	TZ53_00020	TZ53_09660	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.755
AJR22411.1	AJR23952.1	TZ53_00020	TZ53_09675	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.735
AJR22411.1	AJR23983.1	TZ53_00020	TZ53_09885	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.731
AJR22411.1	AJR25929.1	TZ53_00020	TZ53_21455	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.433
AJR22411.1	AJR26298.1	TZ53_00020	TZ53_09670	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	SapC-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.734
AJR22411.1	AJR26559.1	TZ53_00020	TZ53_21475	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.624
AJR23646.1	AJR23950.1	TZ53_07885	TZ53_09660	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741
AJR23646.1	AJR23952.1	TZ53_07885	TZ53_09675	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.737
AJR23646.1	AJR23983.1	TZ53_07885	TZ53_09885	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.714
AJR23646.1	AJR25929.1	TZ53_07885	TZ53_21455	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.429
AJR23646.1	AJR26298.1	TZ53_07885	TZ53_09670	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	SapC-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.725
AJR23646.1	AJR26559.1	TZ53_07885	TZ53_21475	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.556
AJR23950.1	AJR22411.1	TZ53_09660	TZ53_00020	Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.755
AJR23950.1	AJR23646.1	TZ53_09660	TZ53_07885	Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741
AJR23950.1	AJR23951.1	TZ53_09660	TZ53_09665	Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.897
AJR23950.1	AJR23952.1	TZ53_09660	TZ53_09675	Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.867
AJR23950.1	AJR23983.1	TZ53_09660	TZ53_09885	Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
AJR23950.1	AJR25928.1	TZ53_09660	TZ53_21450	Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.760
AJR23950.1	AJR25929.1	TZ53_09660	TZ53_21455	Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.569
AJR23950.1	AJR26298.1	TZ53_09660	TZ53_09670	Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	SapC-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.846