10 items (Sphingobium sp. YBL2) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AJR22409.1	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family. (341 aa)
	AJR22410.1	Arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family. (473 aa)
	AJR23947.1	alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (522 aa)
	AJR23954.1	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (635 aa)
	AJR23955.1	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (777 aa)
	AJR23956.1	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family. (519 aa)
	AJR23957.1	Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family. (330 aa)
	AJR26372.1	Carbohydrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family. (449 aa)
	AJR24483.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (770 aa)
	AJR24484.1	alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (534 aa)

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR22409.1	AJR22410.1	TZ53_00010	TZ53_00015	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	0.888
AJR22409.1	AJR23947.1	TZ53_00010	TZ53_09645	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.770
AJR22409.1	AJR23954.1	TZ53_00010	TZ53_09690	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.586
AJR22409.1	AJR23955.1	TZ53_00010	TZ53_09695	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.698
AJR22409.1	AJR23956.1	TZ53_00010	TZ53_09700	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	0.767
AJR22409.1	AJR23957.1	TZ53_00010	TZ53_09710	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	0.765
AJR22409.1	AJR24483.1	TZ53_00010	TZ53_12885	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.781
AJR22409.1	AJR24484.1	TZ53_00010	TZ53_12890	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.770
AJR22409.1	AJR26372.1	TZ53_00010	TZ53_12880	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Carbohydrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	0.764
AJR22410.1	AJR22409.1	TZ53_00015	TZ53_00010	Arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	0.888
AJR22410.1	AJR23947.1	TZ53_00015	TZ53_09645	Arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.770
AJR22410.1	AJR23956.1	TZ53_00015	TZ53_09700	Arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	0.732
AJR22410.1	AJR23957.1	TZ53_00015	TZ53_09710	Arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	0.745
AJR22410.1	AJR24483.1	TZ53_00015	TZ53_12885	Arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.762
AJR22410.1	AJR24484.1	TZ53_00015	TZ53_12890	Arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.764
AJR22410.1	AJR26372.1	TZ53_00015	TZ53_12880	Arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	Carbohydrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	0.730
AJR23947.1	AJR22409.1	TZ53_09645	TZ53_00010	alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	0.770
AJR23947.1	AJR22410.1	TZ53_09645	TZ53_00015	alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.	0.770
AJR23947.1	AJR23954.1	TZ53_09645	TZ53_09690	alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.415
AJR23947.1	AJR23955.1	TZ53_09645	TZ53_09695	alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.622