STRINGSTRING
AJR25612.1 AJR25612.1 cobQ cobQ AJR22610.1 AJR22610.1 AJR23559.1 AJR23559.1 cobD cobD AJR23079.1 AJR23079.1 AJR26147.1 AJR26147.1 AJR23967.1 AJR23967.1 AJR26289.1 AJR26289.1 AJR23750.1 AJR23750.1 AJR23612.1 AJR23612.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJR25612.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (1017 aa)
cobQCobalamin biosynthesis protein CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (483 aa)
AJR22610.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (604 aa)
AJR23559.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (939 aa)
cobDAdenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (311 aa)
AJR23079.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (962 aa)
AJR26147.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (909 aa)
AJR23967.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (989 aa)
AJR26289.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (1022 aa)
AJR23750.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (767 aa)
AJR23612.1TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology. (968 aa)
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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