(5 nodes) Hydrogen sulfide biosynthetic process network (Sphingobium sp. YBL2)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	cysN	Adenylyltransferase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (637 aa)
	AJR23464.1	Cobalamin biosynthesis protein CobG; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
	AJR24960.1	Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (543 aa)
	AJR24958.1	Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. (263 aa)
	cysD	Sulfate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)

Your Current Organism:

Sphingobium sp. YBL2

NCBI taxonomy Id: 484429
Other names: S. sp. YBL2

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AJR23464.1	AJR24958.1	TZ53_06715	TZ53_15725	Cobalamin biosynthesis protein CobG; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.	0.804
AJR23464.1	cysD	TZ53_06715	TZ53_07905	Cobalamin biosynthesis protein CobG; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
AJR23464.1	cysN	TZ53_06715	TZ53_07910	Cobalamin biosynthesis protein CobG; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenylyltransferase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.	0.981
AJR24958.1	AJR23464.1	TZ53_15725	TZ53_06715	Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.	Cobalamin biosynthesis protein CobG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.804
AJR24958.1	AJR24960.1	TZ53_15725	TZ53_15735	Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.	Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AJR24958.1	cysD	TZ53_15725	TZ53_07905	Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.	Sulfate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.978
AJR24958.1	cysN	TZ53_15725	TZ53_07910	Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.	Adenylyltransferase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.	0.999
AJR24960.1	AJR24958.1	TZ53_15735	TZ53_15725	Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.	0.999
AJR24960.1	cysD	TZ53_15735	TZ53_07905	Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.809
AJR24960.1	cysN	TZ53_15735	TZ53_07910	Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenylyltransferase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.	0.981
cysD	AJR23464.1	TZ53_07905	TZ53_06715	Sulfate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cobalamin biosynthesis protein CobG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.784
cysD	AJR24958.1	TZ53_07905	TZ53_15725	Sulfate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.	0.978
cysD	AJR24960.1	TZ53_07905	TZ53_15735	Sulfate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.809
cysD	cysN	TZ53_07905	TZ53_07910	Sulfate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Adenylyltransferase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.	0.999
cysN	AJR23464.1	TZ53_07910	TZ53_06715	Adenylyltransferase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.	Cobalamin biosynthesis protein CobG; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
cysN	AJR24958.1	TZ53_07910	TZ53_15725	Adenylyltransferase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.	Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.	0.999
cysN	AJR24960.1	TZ53_07910	TZ53_15735	Adenylyltransferase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.	Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
cysN	cysD	TZ53_07910	TZ53_07905	Adenylyltransferase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.	Sulfate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999