STRINGSTRING
AJR25787.1 AJR25787.1 AJR22422.1 AJR22422.1 AJR22482.1 AJR22482.1 AJR22484.1 AJR22484.1 AJR22485.1 AJR22485.1 AJR22489.1 AJR22489.1 AJR22507.1 AJR22507.1 AJR24306.1 AJR24306.1 thiG thiG AJR24325.1 AJR24325.1 AJR24369.1 AJR24369.1 AJR26356.1 AJR26356.1 AJR24396.1 AJR24396.1 AJR24399.1 AJR24399.1 AJR24400.1 AJR24400.1 AJR24407.1 AJR24407.1 AJR26362.1 AJR26362.1 AJR24494.1 AJR24494.1 AJR24510.1 AJR24510.1 AJR24541.1 AJR24541.1 rpoC rpoC rpoB rpoB AJR24618.1 AJR24618.1 AJR24650.1 AJR24650.1 AJR24656.1 AJR24656.1 AJR24658.1 AJR24658.1 AJR24666.1 AJR24666.1 rplA rplA rplK rplK pyrB pyrB AJR24690.1 AJR24690.1 AJR24709.1 AJR24709.1 AJR24736.1 AJR24736.1 AJR26399.1 AJR26399.1 AJR24754.1 AJR24754.1 AJR24760.1 AJR24760.1 AJR24769.1 AJR24769.1 AJR26404.1 AJR26404.1 sucD sucD sucA sucA AJR24812.1 AJR24812.1 xerC-2 xerC-2 accA accA AJR24856.1 AJR24856.1 AJR24858.1 AJR24858.1 AJR24893.1 AJR24893.1 AJR24899.1 AJR24899.1 hisH hisH AJR26436.1 AJR26436.1 AJR24970.1 AJR24970.1 AJR25013.1 AJR25013.1 AJR25014.1 AJR25014.1 AJR25028.1 AJR25028.1 leuD leuD AJR22554.1 AJR22554.1 AJR26069.1 AJR26069.1 gcvH gcvH gcvPA gcvPA AJR22550.1 AJR22550.1 xerC xerC AJR22614.1 AJR22614.1 AJR22616.1 AJR22616.1 ppk ppk AJR22672.1 AJR22672.1 AJR22683.1 AJR22683.1 AJR22709.1 AJR22709.1 AJR22713.1 AJR22713.1 AJR22728.1 AJR22728.1 AJR26101.1 AJR26101.1 AJR22759.1 AJR22759.1 AJR22768.1 AJR22768.1 apt apt AJR22781.1 AJR22781.1 AJR22814.1 AJR22814.1 AJR22842.1 AJR22842.1 AJR22870.1 AJR22870.1 uvrB uvrB AJR22894.1 AJR22894.1 xseB xseB AJR26137.1 AJR26137.1 ruvC ruvC AJR22916.1 AJR22916.1 AJR22917.1 AJR22917.1 AJR26140.1 AJR26140.1 AJR22927.1 AJR22927.1 AJR22938.1 AJR22938.1 pyrD pyrD xseA xseA AJR22982.1 AJR22982.1 AJR22983.1 AJR22983.1 ruvA ruvA ruvB ruvB AJR23030.1 AJR23030.1 AJR23032.1 AJR23032.1 AJR23034.1 AJR23034.1 AJR23038.1 AJR23038.1 AJR26156.1 AJR26156.1 AJR23068.1 AJR23068.1 AJR23082.1 AJR23082.1 AJR23095.1 AJR23095.1 AJR23096.1 AJR23096.1 AJR23102.1 AJR23102.1 AJR23103.1 AJR23103.1 leuC leuC AJR23104.1 AJR23104.1 AJR23105.1 AJR23105.1 mutS mutS dnaQ dnaQ AJR23165.1 AJR23165.1 AJR23183.1 AJR23183.1 AJR23232.1 AJR23232.1 AJR23234.1 AJR23234.1 AJR26179.1 AJR26179.1 AJR26181.1 AJR26181.1 AJR23237.1 AJR23237.1 AJR23259.1 AJR23259.1 AJR23281.1 AJR23281.1 AJR23285.1 AJR23285.1 AJR26187.1 AJR26187.1 AJR23308.1 AJR23308.1 AJR23345.1 AJR23345.1 AJR26209.1 AJR26209.1 AJR23393.1 AJR23393.1 AJR23394.1 AJR23394.1 pcm pcm AJR23418.1 AJR23418.1 AJR23419.1 AJR23419.1 AJR26223.1 AJR26223.1 AJR23437.1 AJR23437.1 AJR23462.1 AJR23462.1 AJR23469.1 AJR23469.1 AJR23496.1 AJR23496.1 AJR26237.1 AJR26237.1 AJR26245.1 AJR26245.1 AJR26246.1 AJR26246.1 AJR23614.1 AJR23614.1 AJR23648.1 AJR23648.1 cysD cysD cysN cysN AJR23665.1 AJR23665.1 AJR23721.1 AJR23721.1 rpoZ rpoZ AJR23746.1 AJR23746.1 AJR23767.1 AJR23767.1 AJR26278.1 AJR26278.1 AJR23832.1 AJR23832.1 AJR23866.1 AJR23866.1 AJR23867.1 AJR23867.1 AJR23868.1 AJR23868.1 AJR23870.1 AJR23870.1 AJR23871.1 AJR23871.1 AJR23883.1 AJR23883.1 AJR23884.1 AJR23884.1 AJR23885.1 AJR23885.1 AJR23935.1 AJR23935.1 AJR23966.1 AJR23966.1 AJR23968.1 AJR23968.1 ftsE ftsE AJR24021.1 AJR24021.1 pheT pheT pheS pheS AJR24035.1 AJR24035.1 prs prs nadE-2 nadE-2 AJR24041.1 AJR24041.1 gpsA gpsA AJR24050.1 AJR24050.1 ribH ribH AJR24110.1 AJR24110.1 AJR26317.1 AJR26317.1 tldD tldD AJR24131.1 AJR24131.1 AJR24136.1 AJR24136.1 AJR26319.1 AJR26319.1 rpoA rpoA AJR26322.1 AJR26322.1 AJR24168.1 AJR24168.1 AJR24169.1 AJR24169.1 AJR24170.1 AJR24170.1 AJR26326.1 AJR26326.1 AJR24187.1 AJR24187.1 AJR24199.1 AJR24199.1 AJR24209.1 AJR24209.1 AJR26338.1 AJR26338.1 AJR24245.1 AJR24245.1 AJR24305.1 AJR24305.1 rph rph AJR26039.1 AJR26039.1 AJR26037.1 AJR26037.1 nadE nadE AJR25957.1 AJR25957.1 dnaE2 dnaE2 AJR25906.1 AJR25906.1 sucC sucC uvrA uvrA trmB trmB ku ku AJR25814.1 AJR25814.1 AJR25813.1 AJR25813.1 AJR26533.1 AJR26533.1 AJR25810.1 AJR25810.1 nuoB nuoB nuoC nuoC AJR25782.1 AJR25782.1 AJR26532.1 AJR26532.1 nuoI nuoI nuoK nuoK AJR25776.1 AJR25776.1 AJR25771.1 AJR25771.1 AJR25763.1 AJR25763.1 AJR25762.1 AJR25762.1 AJR25755.1 AJR25755.1 AJR25751.1 AJR25751.1 AJR25715.1 AJR25715.1 AJR25711.1 AJR25711.1 AJR25710.1 AJR25710.1 AJR25697.1 AJR25697.1 AJR25664.1 AJR25664.1 AJR25652.1 AJR25652.1 clpX clpX rpoH rpoH AJR25628.1 AJR25628.1 AJR26514.1 AJR26514.1 glyQ glyQ glyS glyS cobQ cobQ AJR25544.1 AJR25544.1 AJR25510.1 AJR25510.1 AJR25509.1 AJR25509.1 AJR25505.1 AJR25505.1 hslV hslV AJR25475.1 AJR25475.1 AJR25466.1 AJR25466.1 AJR25463.1 AJR25463.1 AJR25451.1 AJR25451.1 AJR25444.1 AJR25444.1 AJR25435.1 AJR25435.1 AJR26492.1 AJR26492.1 AJR26489.1 AJR26489.1 AJR25424.1 AJR25424.1 fbiC-2 fbiC-2 AJR25421.1 AJR25421.1 AJR25385.1 AJR25385.1 AJR25384.1 AJR25384.1 AJR25349.1 AJR25349.1 AJR25331.1 AJR25331.1 AJR25312.1 AJR25312.1 AJR25311.1 AJR25311.1 AJR25308.1 AJR25308.1 AJR25284.1 AJR25284.1 AJR25252.1 AJR25252.1 accD accD AJR25239.1 AJR25239.1 AJR25234.1 AJR25234.1 dnaX dnaX AJR25198.1 AJR25198.1 fbiC fbiC AJR25184.1 AJR25184.1 glgC glgC AJR25169.1 AJR25169.1 AJR25166.1 AJR25166.1 AJR25139.1 AJR25139.1 eno eno carB carB carA carA dnaG dnaG rpoD rpoD AJR25114.1 AJR25114.1 AJR25106.1 AJR25106.1 uvrC uvrC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJR25787.1Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the inositol monophosphatase superfamily. (270 aa)
AJR22422.1Nitrilotriacetate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)
AJR22482.13-hydroxy-2-methylbutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (253 aa)
AJR22484.1Branched-chain alpha-keto acid dehydrogenase subunit E2; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (431 aa)
AJR22485.1Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (779 aa)
AJR22489.13-hydroxy-2-methylbutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (253 aa)
AJR22507.1DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology. (291 aa)
AJR24306.1acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (161 aa)
thiGThiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. (335 aa)
AJR24325.1Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (150 aa)
AJR24369.1Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology. (215 aa)
AJR26356.1Deoxyguanosinetriphosphate triphosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dGTPase family. Type 2 subfamily. (446 aa)
AJR24396.1Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (416 aa)
AJR24399.1uvrD/REP helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily. (1052 aa)
AJR24400.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (895 aa)
AJR24407.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (158 aa)
AJR26362.1Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (173 aa)
AJR24494.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (633 aa)
AJR24510.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)
AJR24541.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (71 aa)
rpoCDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1418 aa)
rpoBDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1387 aa)
AJR24618.1LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (375 aa)
AJR24650.1Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (526 aa)
AJR24656.1Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (112 aa)
AJR24658.1Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (888 aa)
AJR24666.1GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (196 aa)
rplA50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. (232 aa)
rplK50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. (143 aa)
pyrBAspartate carbamoyltransferase catalytic subunit; Catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. (336 aa)
AJR24690.1RNA polymerase subunit sigma-70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (172 aa)
AJR24709.1Amylo-alpha-1,6-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (749 aa)
AJR24736.1DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology. (149 aa)
AJR26399.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)
AJR24754.1Exonuclease V subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (920 aa)
AJR24760.1protein-L-isoaspartate O-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (210 aa)
AJR24769.1Redox protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family. (71 aa)
AJR26404.1Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
sucDsuccinate--CoA ligase; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. (294 aa)
sucASucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology. (931 aa)
AJR24812.1Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (413 aa)
xerC-2Recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (305 aa)
accAacetyl-CoA carboxylase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (314 aa)
AJR24856.1methylcrotonoyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (533 aa)
AJR24858.1methylcrotonoyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (632 aa)
AJR24893.1Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
AJR24899.1RNA polymerase sigma factor SigJ; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
hisHImidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. (205 aa)
AJR26436.1RNA polymerase sigma70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (162 aa)
AJR24970.13-hydroxy-2-methylbutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
AJR25013.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)
AJR25014.1Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
AJR25028.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0758 family. (231 aa)
leuD3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (197 aa)
AJR22554.1Deoxyguanosinetriphosphate triphosphohydrolase; dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
AJR26069.1Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
gcvHGlycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (123 aa)
gcvPAGlycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. (452 aa)
AJR22550.1Glycine dehydrogenase; Acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (523 aa)
xerCRecombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (298 aa)
AJR22614.1Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. (873 aa)
AJR22616.1Nitrate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
ppkPolyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. (712 aa)
AJR22672.1Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (418 aa)
AJR22683.1Ubiquinone biosynthesis methyltransferase UbiE; Derived by automated computational analysis using gene prediction method: Protein Homology. (244 aa)
AJR22709.1AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)
AJR22713.1DNA-directed RNA polymerase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
AJR22728.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)
AJR26101.1AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (161 aa)
AJR22759.1RNA polymerase sigma-70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. (193 aa)
AJR22768.1Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (109 aa)
aptAdenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (178 aa)
AJR22781.1Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (439 aa)
AJR22814.1RNA polymerase sigma70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. (245 aa)
AJR22842.1DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (370 aa)
AJR22870.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (197 aa)
uvrBExcinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (727 aa)
AJR22894.1NADH dehydrogenase; Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (132 aa)
xseBExodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (86 aa)
AJR26137.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0145 family. (105 aa)
ruvCCrossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. (163 aa)
AJR22916.1Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (738 aa)
AJR22917.1Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)
AJR26140.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
AJR22927.1ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family. (764 aa)
AJR22938.1HesB/YadR/YfhF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family. (120 aa)
pyrDDihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (345 aa)
xseAExodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (499 aa)
AJR22982.1Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
AJR22983.1Modulator protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (448 aa)
ruvAATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (202 aa)
ruvBATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (339 aa)
AJR23030.1ADP-ribose pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)
AJR23032.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)
AJR23034.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (661 aa)
AJR23038.1Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (107 aa)
AJR26156.1ECF-type sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (168 aa)
AJR23068.1Carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
AJR23082.1Carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)
AJR23095.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
AJR23096.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (447 aa)
AJR23102.1RNA polymerase sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology. (81 aa)
AJR23103.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family. (333 aa)
leuCIsopropylmalate isomerase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (484 aa)
AJR23104.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
AJR23105.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family. (413 aa)
mutSDNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. (883 aa)
dnaQDNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. (230 aa)
AJR23165.1DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)
AJR23183.12-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (310 aa)
AJR23232.14-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (128 aa)
AJR23234.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (535 aa)
AJR26179.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (292 aa)
AJR26181.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family. (548 aa)
AJR23237.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
AJR23259.1Carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)
AJR23281.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
AJR23285.1Dihydrolipoamide acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (76 aa)
AJR26187.1Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
AJR23308.1Carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
AJR23345.1DNA relaxase; Derived by automated computational analysis using gene prediction method: Protein Homology. (976 aa)
AJR26209.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (123 aa)
AJR23393.1Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
AJR23394.1Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (770 aa)
pcmprotein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins. (665 aa)
AJR23418.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)
AJR23419.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (80 aa)
AJR26223.1Pyruvate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)
AJR23437.1Malto-oligosyltrehalose trehalohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (569 aa)
AJR23462.1Cobalamin biosynthesis protein CobN; Derived by automated computational analysis using gene prediction method: Protein Homology. (1259 aa)
AJR23469.1precorrin-6Y methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (402 aa)
AJR23496.1Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1198 aa)
AJR26237.1Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (544 aa)
AJR26245.1Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (226 aa)
AJR26246.1AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
AJR23614.1Glycerol-3-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)
AJR23648.1Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology. (347 aa)
cysDSulfate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
cysNAdenylyltransferase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. (637 aa)
AJR23665.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (100 aa)
AJR23721.1Deoxyguanosinetriphosphate triphosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dGTPase family. Type 2 subfamily. (446 aa)
rpoZDNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (114 aa)
AJR23746.1Glycerol-3-phosphate dehydrogenase; In Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (502 aa)
AJR23767.13-hydroxy-2-methylbutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (253 aa)
AJR26278.1RNA polymerase sigma-70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (195 aa)
AJR23832.1Alkanesulfonate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (362 aa)
AJR23866.14Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)
AJR23867.1Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (530 aa)
AJR23868.1Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (447 aa)
AJR23870.1Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)
AJR23871.1Taurine catabolism dioxygenase TauD; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
AJR23883.1ATP synthase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)
AJR23884.1Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (526 aa)
AJR23885.1Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (948 aa)
AJR23935.1Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)
AJR23966.1Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1014 aa)
AJR23968.1Gluconolaconase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1016 aa)
ftsECell division protein FtsE; Part of the ABC transporter FtsEX involved in cellular division. (236 aa)
AJR24021.12-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (319 aa)
pheTphenylalanyl-tRNA synthetase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. (804 aa)
pheSphenylalanyl-tRNA synthetase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. (367 aa)
AJR24035.1Histidinol phosphate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)
prsPhosphoribosylpyrophosphate synthetase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. (311 aa)
nadE-2NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. (553 aa)
AJR24041.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
gpsAGlycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (328 aa)
AJR24050.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (616 aa)
ribH6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. (140 aa)
AJR24110.1enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
AJR26317.1ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology. (590 aa)
tldDProtease TldD; Responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA; Derived by automated computational analysis using gene prediction method: Protein Homology. (480 aa)
AJR24131.1RNA polymerase sigma54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (504 aa)
AJR24136.1Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (483 aa)
AJR26319.13-beta hydroxysteroid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)
rpoADNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (354 aa)
AJR26322.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (76 aa)
AJR24168.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
AJR24169.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (307 aa)
AJR24170.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)
AJR26326.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)
AJR24187.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (803 aa)
AJR24199.1Exonuclease V subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (920 aa)
AJR24209.1ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. (502 aa)
AJR26338.1Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. (651 aa)
AJR24245.1Ribonucleotide-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. (351 aa)
AJR24305.1acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (448 aa)
rphRibonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. (238 aa)
AJR26039.1Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)
AJR26037.1Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (604 aa)
nadENAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. (690 aa)
AJR25957.1Coenzyme F420 hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (457 aa)
dnaE2DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. (1193 aa)
AJR25906.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)
sucCsuccinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. (399 aa)
uvrAExcinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (970 aa)
trmBtRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (231 aa)
kuDNA repair protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family. (300 aa)
AJR25814.1ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)
AJR25813.1DNA repair protein RadC; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)
AJR26533.12-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
AJR25810.1Branched-chain alpha-keto acid dehydrogenase subunit E2; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
nuoBNADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (184 aa)
nuoCNADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (278 aa)
AJR25782.1NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
AJR26532.1NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (438 aa)
nuoINADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (161 aa)
nuoKNADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (101 aa)
AJR25776.1NADH:ubiquinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology. (699 aa)
AJR25771.1RNA-metabolising metallo-beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (545 aa)
AJR25763.1Phyllosphere-induced regulator PhyR; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
AJR25762.1RNA polymerase sigma 70; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (218 aa)
AJR25755.12-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (332 aa)
AJR25751.1FecI sigma-24 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (193 aa)
AJR25715.1Nitrogen-fixing protein NifU; Derived by automated computational analysis using gene prediction method: Protein Homology. (140 aa)
AJR25711.1Molybdenum cofactor biosynthesis protein MoaD; Derived by automated computational analysis using gene prediction method: Protein Homology. (86 aa)
AJR25710.1Molybdopterin synthase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)
AJR25697.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (145 aa)
AJR25664.1Branched-chain alpha-keto acid dehydrogenase subunit E2; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (432 aa)
AJR25652.1Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (159 aa)
clpXClp protease ATP-binding protein; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP. (422 aa)
rpoHRNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. (304 aa)
AJR25628.1Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)
AJR26514.1AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)
glyQglycyl-tRNA synthetase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (290 aa)
glySglycyl-tRNA synthetase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology. (696 aa)
cobQCobalamin biosynthesis protein CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily. (483 aa)
AJR25544.1DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (1178 aa)
AJR25510.1acetyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (666 aa)
AJR25509.1tRNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (123 aa)
AJR25505.1ATP-dependent protease; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. (433 aa)
hslVPeptidase; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery. (188 aa)
AJR25475.1DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa)
AJR25466.1Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)
AJR25463.1DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily. (1147 aa)
AJR25451.1Bicarbonate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)
AJR25444.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)
AJR25435.1F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
AJR26492.1Bile-acid 7-alpha dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)
AJR26489.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (358 aa)
AJR25424.1Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
fbiC-2FO synthase; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase; catalyzes radical-mediated transfer of hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); functions in F420 biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (779 aa)
AJR25421.1Methylene-tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
AJR25385.1(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (461 aa)
AJR25384.1Aromatic-ring-hydroxylating dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (191 aa)
AJR25349.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
AJR25331.1DNA relaxase; Derived by automated computational analysis using gene prediction method: Protein Homology. (981 aa)
AJR25312.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (294 aa)
AJR25311.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (175 aa)
AJR25308.1Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
AJR25284.1Sigma-70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (188 aa)
AJR25252.1ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
accDacetyl-CoA carboxyl transferase; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (283 aa)
AJR25239.1Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (152 aa)
AJR25234.1DNA helicase II; Derived by automated computational analysis using gene prediction method: Protein Homology. (758 aa)
dnaXDNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (536 aa)
AJR25198.12-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)
fbiCFO synthase; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase; catalyzes radical-mediated transfer of hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl-8-hydroxy-5-deazariboflavin (FO); functions in F420 biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (802 aa)
AJR25184.1Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
glgCGlucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (419 aa)
AJR25169.1RNA polymerase sigma-70 factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily. (170 aa)
AJR25166.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)
AJR25139.1Pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (463 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (424 aa)
carBCarbamoyl phosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarB family. (1111 aa)
carACarbamoyl-phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarA family. (387 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (633 aa)
rpoDRNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (681 aa)
AJR25114.1ATP-dependent DNA helicase RecG; Derived by automated computational analysis using gene prediction method: Protein Homology. (687 aa)
AJR25106.1Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)
uvrCExcinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (637 aa)
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
Server load: low (22%) [HD]