STRINGSTRING
AJR24807.1 AJR24807.1 AJR25781.1 AJR25781.1 AJR25430.1 AJR25430.1 AJR25213.1 AJR25213.1 AJR26140.1 AJR26140.1 AJR23268.1 AJR23268.1 AJR26203.1 AJR26203.1 AJR23848.1 AJR23848.1 AJR23857.1 AJR23857.1 AJR23885.1 AJR23885.1 AJR26326.1 AJR26326.1 AJR24267.1 AJR24267.1 AJR24513.1 AJR24513.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AJR24807.1Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (262 aa)
AJR25781.1NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (668 aa)
AJR25430.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa)
AJR25213.12Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (111 aa)
AJR26140.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
AJR23268.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa)
AJR26203.1Reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)
AJR23848.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (115 aa)
AJR23857.1Phenol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (352 aa)
AJR23885.1Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (948 aa)
AJR26326.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)
AJR24267.1Isoquinoline 1-oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (178 aa)
AJR24513.1Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (105 aa)
Your Current Organism:
Sphingobium sp. YBL2
NCBI taxonomy Id: 484429
Other names: S. sp. YBL2
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