STRINGSTRING
UFO1_2963 UFO1_2963 UFO1_3045 UFO1_3045 UFO1_3282 UFO1_3282 UFO1_3688 UFO1_3688 UFO1_3852 UFO1_3852
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UFO1_2963TIGRFAM: succinate CoA transferase; KEGG: succinate CoA transferase; PFAM: Acetyl-CoA hydrolase/transferase C-terminal domain, acetyl-CoA hydrolase/transferase. (501 aa)
UFO1_3045TIGRFAM: succinate CoA transferase; KEGG: succinate CoA transferase; PFAM: Acetyl-CoA hydrolase/transferase C-terminal domain, acetyl-CoA hydrolase/transferase. (501 aa)
UFO1_3282TIGRFAM: acetyl-CoA acetyltransferase; KEGG: acetyl-CoA acetyltransferase; PFAM: Thiolase domain-containing protein; Belongs to the thiolase-like superfamily. Thiolase family. (379 aa)
UFO1_3688TIGRFAM: acetyl-CoA acetyltransferase; KEGG: thiolase; PFAM: Thiolase domain-containing protein; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
UFO1_3852KEGG: nifV, homocitrate synthase; PFAM: pyruvate carboxyltransferase. (362 aa)
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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