STRINGSTRING
fumC fumC UFO1_3062 UFO1_3062 UFO1_3063 UFO1_3063 UFO1_3064 UFO1_3064 UFO1_3065 UFO1_3065 UFO1_3066 UFO1_3066
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fumCFumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. (461 aa)
UFO1_3062TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: sdhB, putative succinate dehydrogenase iron-sulfur subunit; PFAM: Succinate dehydogenase/fumarate reductase N-terminal, 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein. (252 aa)
UFO1_3063TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; KEGG: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein, Fumarate reductase/succinate dehydrogenase flavoprotein-like protein. (583 aa)
UFO1_3064PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: sdhC, hypothetical protein. (204 aa)
UFO1_3065TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; KEGG: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region. (185 aa)
UFO1_3066TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; KEGG: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region. (281 aa)
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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