STRINGSTRING
UFO1_0396 UFO1_0396 UFO1_0955 UFO1_0955 UFO1_0956 UFO1_0956 UFO1_3891 UFO1_3891 UFO1_4394 UFO1_4394 UFO1_4395 UFO1_4395
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UFO1_0396TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein; KEGG: signal transduction histidine kinase nitrogen specific-like protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein. (348 aa)
UFO1_0955KEGG: integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein. (429 aa)
UFO1_0956Two component transcriptional regulator, winged helix family; KEGG: response regulator with CheY-like receiver domain and winged-helix DNA-binding domain; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein. (224 aa)
UFO1_3891KEGG: response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver. (124 aa)
UFO1_4394KEGG: integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein. (435 aa)
UFO1_4395Two component transcriptional regulator, winged helix family; KEGG: transcriptional regulator; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein. (230 aa)
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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