STRINGSTRING
UFO1_0310 UFO1_0310 UFO1_0313 UFO1_0313 UFO1_1076 UFO1_1076 UFO1_1077 UFO1_1077 UFO1_1078 UFO1_1078 UFO1_1079 UFO1_1079 UFO1_3344 UFO1_3344 UFO1_3346 UFO1_3346 UFO1_3347 UFO1_3347 UFO1_3348 UFO1_3348 UFO1_3349 UFO1_3349
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UFO1_0310PFAM: PTS system fructose subfamily IIA component; KEGG: PTS system fructose IIA component. (140 aa)
UFO1_0313PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: PTS system mannose/fructose/sorbose family transporter subunit IID. (271 aa)
UFO1_1076KEGG: PTS system mannose/fructose/sorbose family transporter subunit IIA; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA subunit; PFAM: PTS system fructose subfamily IIA component. (131 aa)
UFO1_1077Protein-N(pi)-phosphohistidine--sugar phosphotransferase; KEGG: PTS system, mannose/fructose/sorbose family, IIB subunit; PFAM: PTS system sorbose subfamily IIB component. (157 aa)
UFO1_1078PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; KEGG: sorA, sorbose permease IIC component PTS system sorbose-specific EIIC component, EIIC-Sor. (244 aa)
UFO1_1079KEGG: PTS system mannose/fructose/sorbose family transporter subunit IID; TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component. (270 aa)
UFO1_3344TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; KEGG: PTS system sorbose-specific transporter subunit IIB; PFAM: PTS system sorbose subfamily IIB component. (162 aa)
UFO1_3346KEGG: PTS system mannose/fructose/sorbose family transporter subunit IID; TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component. (273 aa)
UFO1_3347PTS system, mannose/fructose/sorbose family, IIC subunit; KEGG: sorA, sorbose permease IIC component PTS system sorbose-specific EIIC component, EIIC-Sor; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS sorbose-specific IIC subunit. (255 aa)
UFO1_3348TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; KEGG: PTS system sorbose-specific transporter subunit IIB; PFAM: PTS system sorbose subfamily IIB component. (160 aa)
UFO1_3349KEGG: PTS system mannose/fructose/sorbose family transporter subunit IIA; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA subunit; PFAM: PTS system fructose subfamily IIA component. (139 aa)
Your Current Organism:
Pelosinus sp. UFO1
NCBI taxonomy Id: 484770
Other names: P. sp. UFO1, Pelosinus lilaceae
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